Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01189 ATGTGCAAAGGCGTGGAAGAAAAACAGCGTGGTGGTTCATGCAGGAGCTTCCCACCTCAACAGAATTCTTCATTTTCTGCAACGAGAGGTTCTTCTACATCTTGTGAACTGTGTGGTTTGCAGGCTTCATTGTATTGTCCAGCGGATAATGCGTATTTGTGCAGAGAATGTGACAAATGGGTTCACAGAGCCAATTTTTTTGCCCTTAGACATGTGAGGTGCTTTTTGTGCAACACATGTCAGAACCTTACACACAGATATCTGATTGGAATCACAGCAGAGATCCTTCTTCCACTAAGATGGATTGTGCAAAAACAGAACCTTCCTAACAACAACACCCATGGATTTTGTTCAAGAAAGATTAACAGAACTTCCATCTTTCTCTAG 387 0.4212 MCKGVEEKQRGGSCRSFPPQQNSSFSATRGSSTSCELCGLQASLYCPADNAYLCRECDKWVHRANFFALRHVRCFLCNTCQNLTHRYLIGITAEILLPLRWIVQKQNLPNNNTHGFCSRKINRTSIFL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01189 128 SMART bboxneu5 30 76 IPR000315 GO:0008270
Phco9g01189 128 CDD Bbox1_BBX-like 35 76 - -
Phco9g01189 128 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 34 84 - -
Phco9g01189 128 MobiDBLite consensus disorder prediction 14 32 - -
Phco9g01189 128 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01189 Phco-Chr9 11347772 11348158 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco9g01189 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01189 9 11347772 11348158 Phco9g01189 9 11347772 11348158 ECH
Phco10g01295 10 35278312 35278686 Phco9g01189 9 11347772 11348158 PCT