Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01186 ATGATGGCGCTAAGCAAGTTTATCAACTGGAACAGTCTTCAAATTTCTGATTCAGAAACAAGCACTTTTAACGAAGCCAAGTCAGAGGAAGTGGCACCAAATATCCAGCACTTGTTTCCCTACTCGGATGAAAGCTTCTTCCTTTCAAATACCCTTTTTGAAAATTACATTGACCCAAATGCTGCTTTTCTCTATTCTTCAGATATTCACTCTCCTTTTGATACTTTCATTTCACTCCCTCATGAAGATTACAATCATTTCTCCTACTCAAAACGCCAAAAGCTCTCCTTCGAGGAACAACAAGTACTACTACATTCACAGGAGCTTACAACACCAAAAATAGATGAGTTTGATAATTGTTACTCTTTTCAATCTGAAGAGACACAACAACAATTATTTTGCATGGATCCTCAGTGTGAGGAGAATGGTAAGGAAAGAACCATATCTCCACAGAGCGTTGCCGCAAGAGAAAGAAGAAGAAAGATTACGAATAAGACTCAAAAGCTTGGTAAGTTGGTTCCTGGTGGAACAAAAATGAACACAGCTGATATGCTAAATGCAGTTGCAAAGTATGTTAAGTTCCTTCGAGCCCAAATTGGAATGCTTGAACTCATGAACTCACTCGAGCATGAAGATGAAGCAACACCTGAAATTCTACATGCTTTGGTTGTTTCTCCCTTTATTCAAGAGAAGTTGTATGCATTGGAAAAATGCTTTTTGCCGAAAGAAACTGTCAACACTTTGACAAATCTTGAAGATATTCAATTAAGATCTACCATGCTTGAGGAACTTAAACAGTACATTGGAACAAATAAACCAAAACAAGAATAA 831 0.3742 MMALSKFINWNSLQISDSETSTFNEAKSEEVAPNIQHLFPYSDESFFLSNTLFENYIDPNAAFLYSSDIHSPFDTFISLPHEDYNHFSYSKRQKLSFEEQQVLLHSQELTTPKIDEFDNCYSFQSEETQQQLFCMDPQCEENGKERTISPQSVAARERRRKITNKTQKLGKLVPGGTKMNTADMLNAVAKYVKFLRAQIGMLELMNSLEHEDEATPEILHALVVSPFIQEKLYALEKCFLPKETVNTLTNLEDIQLRSTMLEELKQYIGTNKPKQE 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01186 276 SMART finulus 152 201 IPR011598 GO:0046983
Phco9g01186 276 Gene3D - 144 215 IPR036638 GO:0046983
Phco9g01186 276 Pfam Helix-loop-helix DNA-binding domain 156 195 IPR011598 GO:0046983
Phco9g01186 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 146 195 IPR011598 GO:0046983
Phco9g01186 276 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 148 212 IPR045843 GO:0003700|GO:0006355
Phco9g01186 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 144 206 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01186 Phco-Chr9 11320088 11321106 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco9g01186 HLH 0.00012 No_clan