Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01174 ATGGCCGACATAGATCGCTCCTCTGATAATGCTTCTGCTGATTCTAAAGAAAAATCCCTCCAAAATTCAAATGTTGAATTTTCTGAGGCTGAGGAAACCCTTATTGCCATGGTGTATAATCTGGTTGGGGAGAGGTGGTCTTTGATTGCTGGAAGAATTCCAGGAAGAACTGCAGAAGAGATAGAGAAGTATTGGACTTCAAGATATTCGACAAGCCAATGA 222 0.4144 MADIDRSSDNASADSKEKSLQNSNVEFSEAEETLIAMVYNLVGERWSLIAGRIPGRTAEEIEKYWTSRYSTSQ 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01174 73 ProSiteProfiles Myb-like domain profile. 27 69 IPR001005 -
Phco9g01174 73 SMART sant 23 71 IPR001005 -
Phco9g01174 73 FunFam MYB-like transcription factor 26 68 - -
Phco9g01174 73 CDD SANT 26 65 IPR001005 -
Phco9g01174 73 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 73 IPR017930 -
Phco9g01174 73 Gene3D - 26 68 - -
Phco9g01174 73 Pfam Myb-like DNA-binding domain 26 66 IPR001005 -
Phco9g01174 73 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 26 70 - -
Phco9g01174 73 SUPERFAMILY Homeodomain-like 26 69 IPR009057 -
Phco9g01174 73 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01174 Phco-Chr9 11184836 11185639 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco9g01174 Myb_DNA-binding 1.2e-08 CL0123