Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g01170 | ATGATTGTTGTTGGTAGAAACGTAGAAGACCTTTATACACTATTGCTGATTCAATTGAGGAAAGCACTGAACAAATCACCCAGAGTTCCGACCGCGAGAGAAAGGGACATGGCGACTCTTGATTCCGACGTGCCCATGATTCCGGCCGGCGAGCCATCGAGCAGCGCCGGCCCGTCTGCCAAGAAGCCTAAGCGCTTCGAGATTAAGAAATGGAACGCCGTCGCACTCTGGGCTTGGGACATCGTTGTCGATAACTGTGCCATCTGCCGGAACCACATCATGGATCTCTGCATCGAGTGCCAAGCCAACCAGGCCAGCGCAACTAGCGAAGAATGCACTGTGGCGTGGGGGGTTTGTAATCATGCTTTTCACTTCCATTGCATTAGTCGATGGCTCAAGACCCGTCAAGTTTGTCCTCTAGATAACAGTGAGTGGGAGTTTCAGAAATACGGCCACTAG | 459 | 0.5163 | MIVVGRNVEDLYTLLLIQLRKALNKSPRVPTARERDMATLDSDVPMIPAGEPSSSAGPSAKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH | 152 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g01170 | 152 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 54 | 152 | IPR013083 | - | |
| Phco9g01170 | 152 | FunFam | E3 ubiquitin-protein ligase RBX1 | 53 | 152 | - | - | |
| Phco9g01170 | 152 | SUPERFAMILY | RING/U-box | 64 | 149 | - | - | |
| Phco9g01170 | 152 | PANTHER | RING BOX | 65 | 151 | - | - | |
| Phco9g01170 | 152 | Pfam | RING-H2 zinc finger domain | 84 | 142 | IPR024766 | GO:0008270 | |
| Phco9g01170 | 152 | CDD | mRING-H2-C3H2C2D_RBX1 | 84 | 145 | - | - | |
| Phco9g01170 | 152 | ProSiteProfiles | Zinc finger RING-type profile. | 97 | 142 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco9g01170 | Phco-Chr9 | 11089901 | 11092185 | Dispersed |