Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01119 ATGTTCAACGGTATGATGGATCCCGATTTGATGAGGATCGCTCAGGAGCAAATGAGTCGCATGTCACCTGCTGAGCTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGCTGATGAGGATGGCCTCGGAGAGCATGAGGAACATGAGTTCTGAAGACTTTAAACTTGCGGCTGAGCAGTTAAAGCATACCCGTCCAGAAGAAATGGCTGAGATTGGTGAGAAGATGGCCAATGCGTCCCCTGATGAAGTGGCAGCGATGCGATCCCGGGTTGATGCCCAGATCAAATATCAGTTGAGTGCAGCTGAGATGTTGAAGAAGCAGGGCAATGAACTTCATAGTCAAGGAAAGTTCAGTGAAGCTTTGAAGAAGTATATGCTTGCTAAAGAAAACATTAGAGAGATTCCATCTTTCCAAAGTAGAAAGCTTCTTTTGGCATGTTCTCTCAACTTGATGTCCTGTTACTTGAAGACAAGGCAGTATAATGAGTGCATAAAAGAAGGTTCTGAGGTTCTGGCATATGACTTGAAGAACCTTAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAACTAGGTCGACTAAATGATGCTGTTTCTGATCTGAGCAAGGCACTTGAGGTGTCCCCTGATGATGATACAGTTGCAGAGCTTTTACGGGATGCCAAGGAAAAATTGACAATGGGAGGTGGTGAGCAATCGACTAGCGGACTATTAATCGAAGAAATAACTGAAGAAGGCGAGGATGTGCCTCCTCCAAGCTCTTTGGAACAAACAGTGGTTCAAAAAAAATCTTGTGACACCGCAAAGAGTAGCAGTACAGCTAACAATGGAAATCCAAAATCAAATGCAGACAGTTTAGATGCATTGAGAAAAGATCCTGAAGCTGTCAGGTCATTCCAGAACTTCATTTCAAACACCAATCCTGCCACGCTGGCTTCTCTGAATGCTGGCCAATTCAAAGATGTATCCCCAGATATGATCAAAACTACCTCTGATATGATTAGTAAGATGGCGCCTGATGAACTGCAAAAAATGCTTGACATGGCTTCTTCATTTCAAGGGGACAACCAATTTTTTAGAGGAGGTCCCCCCGATTCTTCTTTCAACCCAGGATCAATGCCTCCCAATGTGACACCTGACATGTTTAAAGCAGCAAGTGATATGATAAGTAAAATGCCAGCTGATGACCTTAAGAAGATGTTTGAAATGGCATCCTCACTGAAAGGGAAAGAATCTATTCCATCAGCAGCAGCAGTAGATGAGATCCAAAGAAAGGTTTATCAGTCAGACATCCCATCATCAAGTACTAATGAAACTACTAATTTTGGGGAATCAAGTTCGTCTCGTAATGTGTTTTCCAATATGAGAAGTGCTTCTCAGTCTAACTTTCCTTCCTCGAGTACTGATCTACAAGAACAGATGAAAAACCAGATGAAAGATCCAGCCATGCGGCAGATGTTCACATCCATGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGTGAACAATTTGGTGTCAAGCTTTCACCAGAAGAGGCAGCAAAAGCTCAGAAAGCCGTCTCATCCATGTCACCGGAGAGCTTGGATAAAATGATGCTTTGGGCAGACAGGATTCACAGAGGAGTTGAATCTGCAAAAAAGACAAAGAACTGGCTGCTAGGGAGGCCTGGCATGATCTTAGCAATATGCATGCTCATTTTGGCTGTCATTCTTCACCGGTTAGGCTTCATTGGTGGCTAG 1752 0.4349 MFNGMMDPDLMRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMRNMSSEDFKLAAEQLKHTRPEEMAEIGEKMANASPDEVAAMRSRVDAQIKYQLSAAEMLKKQGNELHSQGKFSEALKKYMLAKENIREIPSFQSRKLLLACSLNLMSCYLKTRQYNECIKEGSEVLAYDLKNLKALYRRGQAYKELGRLNDAVSDLSKALEVSPDDDTVAELLRDAKEKLTMGGGEQSTSGLLIEEITEEGEDVPPPSSLEQTVVQKKSCDTAKSSSTANNGNPKSNADSLDALRKDPEAVRSFQNFISNTNPATLASLNAGQFKDVSPDMIKTTSDMISKMAPDELQKMLDMASSFQGDNQFFRGGPPDSSFNPGSMPPNVTPDMFKAASDMISKMPADDLKKMFEMASSLKGKESIPSAAAVDEIQRKVYQSDIPSSSTNETTNFGESSSSRNVFSNMRSASQSNFPSSSTDLQEQMKNQMKDPAMRQMFTSMIKNMSPEMMANMGEQFGVKLSPEEAAKAQKAVSSMSPESLDKMMLWADRIHRGVESAKKTKNWLLGRPGMILAICMLILAVILHRLGFIGG 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01119 583 MobiDBLite consensus disorder prediction 246 288 - -
Phco9g01119 583 Pfam Tetratricopeptide repeat 181 213 IPR001440 GO:0005515
Phco9g01119 583 SMART tpr_5 103 136 IPR019734 GO:0005515
Phco9g01119 583 SMART tpr_5 146 179 IPR019734 GO:0005515
Phco9g01119 583 SMART tpr_5 180 213 IPR019734 GO:0005515
Phco9g01119 583 SUPERFAMILY TPR-like 96 226 IPR011990 GO:0005515
Phco9g01119 583 ProSiteProfiles TPR repeat region circular profile. 180 213 - -
Phco9g01119 583 MobiDBLite consensus disorder prediction 431 451 - -
Phco9g01119 583 Gene3D Tetratricopeptide repeat domain 89 233 IPR011990 GO:0005515
Phco9g01119 583 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Phco9g01119 583 MobiDBLite consensus disorder prediction 256 285 - -
Phco9g01119 583 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01119 Phco-Chr9 10305178 10309633 Transposed