Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01083 ATGATCCCTATGGTAACAAAAAGAGCAATAACAGTGCTGCTATATGTGACAGTTCTCCAAACTGTGAAGGGTTTTCCACTACACACCAGTGATAGGTGGATTGTGAATGAAAGTGGGAAGAGGGTGAAGCTAGCATGTGTGAATTGGGTGTCTCATTTGGATACTGTTGTTGCTGAGGGCTTAAACCAACAACCTTTGGACATGATCTCCAAGAGAATCAAGTCTATGGGGTTCAACTGTGTGAGACTCACATGGCCACTTCTCTTGCTCACCAATCACTCTCTTGCTTCTCTCACTGTCAGAAACTCTTTCCAAAACCTTGCTCTTCTTCAATCCATCGATGCTCTTCAAGCCATCAACCCCTCCATGATCGATCTTCCCCTCATCAAAGCTTACCAGGAAGTGGTGAAAAGGCTGGGAGAAAATGATGTAATGGTGATTTTGGACAATCACGTGACTGAACCAGGGTGGTGTTGCAGTAACATGGATGGCAATGGGTTCTTTGGGGATCAGTATTTTGATCCTGACCTCTGGATTATTGGCCTTACCAATATGGCTACACTTTTCAAAGGGGTGACTAATGTGGTTGGCATGAGCTTGAGGAATGAGTTACGAGGTCCCAAACAAGATGTCAACCAATGGTACAGGTATATGCCAAAGGGAGCAGAAGCAGTGCATGCAGCAAATCCAGAAGTTCTTGTCATTCTTTCTGGTCTAAACTTTGACACTGACCTATCATTCATAAAAGAGGAGGCATTGAAACTGAGCTTCAATGGAAAACTAGTGTTGGAGGTGCACTGGTATAGCTTCAGTGAGGGTAAAGCATGGACCTCAAGGAATGCAAACCAAGTGTGTGGGGAAGTCACAGAAAATCAAATGAGAAGGGCAGGGTTCTTGCTGGACCAAGGGTTGCCATTGTTTGTCAGTGAGTTTGGGCTGGACTTGAGAGGCTCAGATGCCAATGACAATAGATACCTAAACTGTTTCATGGCATTTGCAGCCCAACTTGACTTGGATTGGGCCTTGTGGACACTTGGTGGGAGTTACTACATAAGAAACGGAGTTGTTGGAATGAATGAGTATTATGGTATTCTCAATTCAGATTGGAGTGAAGTTAGAAACCCTAGTTTCTTGCAAAGGATCTCAGCTATTCAAATTCCTTTTCAAGGGCCAGGGTTATCAGAAGCAAAACCATTCAAAGTGATTTTTCACCCCTTGACAGGTTTTTGCATCATAAGAAAGACACTGGTTGAGGCATTGAGGTTGGGACCTTGTTCTAATTCTGATGGATGGGAGTACACAGACCAAAACATACTATCAATAAAGGGTACCTATTTCTGTTTACAAGCAGAGGGAGAAGGGAAGCAAGCAAAAATTGGGAATATATGTTTAGCTCCCAATTCAAGATGGGAAATGATCTCTGATTCAAAGATGCATCTATCAACTCAAATCAATAATTCTTCTGGTGTTTGTCTTGATGTAGACAACAATAACATCATTGTCACCAACACTTGCAAATGTCTAAGCAAAGATAACACTTGTGAACCTGCAAGCCAATGGTTTAAACTTGTTGACAGCACAAGGAATAATTAA 1593 0.4244 MIPMVTKRAITVLLYVTVLQTVKGFPLHTSDRWIVNESGKRVKLACVNWVSHLDTVVAEGLNQQPLDMISKRIKSMGFNCVRLTWPLLLLTNHSLASLTVRNSFQNLALLQSIDALQAINPSMIDLPLIKAYQEVVKRLGENDVMVILDNHVTEPGWCCSNMDGNGFFGDQYFDPDLWIIGLTNMATLFKGVTNVVGMSLRNELRGPKQDVNQWYRYMPKGAEAVHAANPEVLVILSGLNFDTDLSFIKEEALKLSFNGKLVLEVHWYSFSEGKAWTSRNANQVCGEVTENQMRRAGFLLDQGLPLFVSEFGLDLRGSDANDNRYLNCFMAFAAQLDLDWALWTLGGSYYIRNGVVGMNEYYGILNSDWSEVRNPSFLQRISAIQIPFQGPGLSEAKPFKVIFHPLTGFCIIRKTLVEALRLGPCSNSDGWEYTDQNILSIKGTYFCLQAEGEGKQAKIGNICLAPNSRWEMISDSKMHLSTQINNSSGVCLDVDNNNIIVTNTCKCLSKDNTCEPASQWFKLVDSTRNN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01083 530 CDD RICIN 399 512 IPR000772 -
Phco9g01083 530 Gene3D Glycosidases 25 386 - -
Phco9g01083 530 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 12 528 - -
Phco9g01083 530 Pfam Cellulase (glycosyl hydrolase family 5) 62 346 IPR001547 GO:0004553|GO:0071704
Phco9g01083 530 Gene3D - 403 521 - -
Phco9g01083 530 SUPERFAMILY (Trans)glycosidases 26 378 IPR017853 -
Phco9g01083 530 SUPERFAMILY Ricin B-like lectins 399 522 IPR035992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01083 Phco-Chr9 9637808 9643834 Dispersed