Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01077 ATGTTCATGTCTTCCACCAAGAAAAGTCTTCTTAGAACCGTGTTCACAGCAAACGGAAGCTGTGGTTGCAGCAAAACAAAAGCCTCTGAAGTGCATGACCCAACCCCAAAACCCAAAACCTCCCACTCTCACCAAAACCCAAACAACCTTAGCAGCATGGCCTCTTCCACCACTTCAATGGAACCCCTAGATGAAGAAGAGTTCACCTCTACCACAGTATCCGAATCCGAGACTTTTCATGATCCCAACAATCACAACAACGTTGTACTCAAACGAAGCCCTCTTGTGGATAGTGTGGCCGTTGAGAAGGACTCTTCCAACCCATATCATGATTTCCGACACTCCATGCTCCAAATGATCTTTGAGAAAGAGATCGAGTCAGAGGACGATCTTCAAGATCTTCTGCAATGCTTTCTTCACCTGAATGCACCATGTAACCACCACGTCATCGTCAAAGCCTTCAACGCCATCTGCGAAGAAGCCTTTCCTCGCAAGGTTAGTACCACTCCGGCTGCGTCTGAACCTTCTCCCTCTCGCCGGAGCCCCCTCGTGGTTCAAAAGAGCAAGTGA 570 0.4842 MFMSSTKKSLLRTVFTANGSCGCSKTKASEVHDPTPKPKTSHSHQNPNNLSSMASSTTSMEPLDEEEFTSTTVSESETFHDPNNHNNVVLKRSPLVDSVAVEKDSSNPYHDFRHSMLQMIFEKEIESEDDLQDLLQCFLHLNAPCNHHVIVKAFNAICEEAFPRKVSTTPAASEPSPSRRSPLVVQKSK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01077 189 MobiDBLite consensus disorder prediction 40 63 - -
Phco9g01077 189 Pfam Transcriptional repressor, ovate 105 160 IPR006458 -
Phco9g01077 189 NCBIfam uncharacterized plant-specific domain TIGR01568 99 158 IPR006458 -
Phco9g01077 189 ProSiteProfiles OVATE domain profile. 101 160 IPR006458 -
Phco9g01077 189 MobiDBLite consensus disorder prediction 169 189 - -
Phco9g01077 189 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Phco9g01077 189 MobiDBLite consensus disorder prediction 166 189 - -
Phco9g01077 189 MobiDBLite consensus disorder prediction 22 63 - -
Phco9g01077 189 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 161 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01077 Phco-Chr9 9577131 9577700 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco9g01077 Ovate 1.7e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01376 10 36361550 36362053 Phco9g01077 9 9577131 9577700 PCT