Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01050 ATGGAAGATCATCCACCTGGTTTTCGCTTCTTCCCAACAGAAGAAGAGCTTGTTGGGTTCTACCTGCACAACAAGCTAGAAGGTTTAAGAAATGCTGCTGCCATAGATAGAGTTATCCCAGTTGTTGATATCAATGCTCTGGAGCCTTGGAACCTCCCAACGCTTGCTGGGGAGCTTTGTCGTGGGGATACAGAGCAATGGTTTTTCTTTTCACCTGGGCAAGAGAGAGAAGCCAGAGGAGGTAGACCTAGCAGAACAACAGCTTGTGGGTACTGGAAAGCTACTGGTTCCCCTGGCTATGTTTATTCTTCAGATAACAGAGTCATTGGGGTGAAGAAATCCATGGTCTTCTACAAAGGAAAAGCCCCTATGGGAAGAAAAACCAAATGGAAAATGAATGAGTACAAAGCTATCTCAGTTCCTCACCAATCCAACTCTGTCGTCCCTGAGTTGAGATGCGAATTCAGCTTATATCGGGTATATATTGTATCTGGAACCTTTCGAGCATTTGATCGACGTCCATCAGAGAGTGAAGGAACAGAGTCACGTGTTCATCAAAGTTCATCTCAAATTTCTCAGTTCCCAGAAGGTGGAGATTCAAGTAGCACAAATTGGAACCAGGTTCAGCTCCAAGAACCTTTATGGGAATTGGAATGGGAACACTTTAATTGGGTCTAA 678 0.444 MEDHPPGFRFFPTEEELVGFYLHNKLEGLRNAAAIDRVIPVVDINALEPWNLPTLAGELCRGDTEQWFFFSPGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNRVIGVKKSMVFYKGKAPMGRKTKWKMNEYKAISVPHQSNSVVPELRCEFSLYRVYIVSGTFRAFDRRPSESEGTESRVHQSSSQISQFPEGGDSSSTNWNQVQLQEPLWELEWEHFNWV 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01050 225 MobiDBLite consensus disorder prediction 172 204 - -
Phco9g01050 225 Gene3D NAC domain 13 165 IPR036093 GO:0003677|GO:0006355
Phco9g01050 225 MobiDBLite consensus disorder prediction 181 204 - -
Phco9g01050 225 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Phco9g01050 225 SUPERFAMILY NAC domain 3 161 IPR036093 GO:0003677|GO:0006355
Phco9g01050 225 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 179 - -
Phco9g01050 225 ProSiteProfiles NAC domain profile. 4 163 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01050 Phco-Chr9 9046804 9047720 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco9g01050 NAM 1.4e-29 No_clan