Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01040 ATGGCTGAGGCGGAGGAACTGCCCCGGACTATCGTGCGCCGTGTTGTGAAGGATAAATTGTCTCGTTGTTCTGAAGAAGGAGAAATTTCCGTCAGCAAAGATGGTCTTCTGGCATTCTCAGAGAGCGGTAGGATCTTCATCCACTACCTTTCTGCCACGGCCAATGACATATGTAAGGAGTCAAAGAGACAGATTATCAGTGCAGAGGATGTTTTCAAAGCTCTTGAAGAAACCGAGTTCTCTGAGTTTGTTCGTCCTCTAAAAGCTTCCCTTGAAGAGTTTAGGAAGAAGAATGTTGGAAAGAAAGCAGCACTGTCAAAGGGTAAAGAAGATGAGTCGAGAAAGAAAAGGAAAATGGAAGCTGAGTCATCTGATAAGGGTGAGGCTTCCAATAATGAAGAGTCATCTGATAAAGGGGAGGGTTCTGATAAAGGTGAGGGCGAGGACAATCAATGA 456 0.4496 MAEAEELPRTIVRRVVKDKLSRCSEEGEISVSKDGLLAFSESGRIFIHYLSATANDICKESKRQIISAEDVFKALEETEFSEFVRPLKASLEEFRKKNVGKKAALSKGKEDESRKKRKMEAESSDKGEASNNEESSDKGEGSDKGEGEDNQ 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01040 151 Gene3D Histone, subunit A 1 149 IPR009072 GO:0046982
Phco9g01040 151 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 4 142 - -
Phco9g01040 151 MobiDBLite consensus disorder prediction 99 151 - -
Phco9g01040 151 FunFam DNA polymerase epsilon subunit 3 1 140 - -
Phco9g01040 151 SUPERFAMILY Histone-fold 7 122 IPR009072 GO:0046982
Phco9g01040 151 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 6 75 IPR003958 -
Phco9g01040 151 Coils Coil 58 78 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Phco9g01040 CBFD_NFYB_HMF 1e-06 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01040 9 8930771 8932508 Phco9g01040 9 8930771 8932508 ECH