Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01036 ATGTACACTCATCTCCAACATCAAGGAAAGAACATTCATTCTTCTTCCAGAATGCCAATCCCTTCTGAGAGACACATGTTCCTTCACACGGGAAATGGATCTGGTGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCTAGATTGAAATGGACACCTGATCTTCATGCCAGGTTTATAGAAGCTGTGCAGCAGTTAGGGGGAGCTGACAAGGCAACTCCCAAAACGGTAATGAAACTCATGGGGATTTCAGGTCTTACTTTGTATCATCTGAAGAGCCATCTTCAGAAGTACAGATTGAGCAAGAGTCTGCATGGACAAAGTAATAATGCGACACACAAAATCTGCATAAACCCAGGTGCAGCAACAGATGAAAGACTCAGAGAAAACAATGGAACGCATGTGAACAATTTAAACCTTGCCCCTCAGTCTAATAACAAAGATTTACACATAAGCGAGGCACTGCAGATGCAAATAGAGGTTCAAAGAAGACTAAATGAGCAACTTGAGGTGCAAAGACTTCTGCAGCTCCGGATTGAGGCTCAAGGAAAGTACCTTCAAGCTGTGCTAGAGAAGGCTCAGGAAACACTTGGTAGACAAAATTTGGGAGTAGTAGGACTTGAAGCTGCAAAACTTCAACTTTCAGATCTAGTGTCCAAAGTGTCCTCTCAGTGTCTGAATTCAGCATTTTTAGAGCTGAAGGAGTTACAAGGATTTAGCCCTCACCAAACACAAACCAACCAGCCAAATGACTGTTCTATGGACAGTTGCCTCACATCTTGTGAGGTGTCACAAAAAGAGCAAGAGATACAAAATGGGGGGATGAACTTAAGACCCTTCAATGTCCACACATTCATGGAACGAAAGGAGGTCATAGAGGGTCCCAATCTTAACAACCTACCAAACACTGACCTCAAATGGTGTGATCCGGTGAAGAACACCTTCCTTACACCATTGAGCAGAAGAAGTCCAAGCAACTTGTCTATGAGCATTGGACTTGAAGGAGAAACTGAGAATGGAAGCACCATTAGGAAAGAATCAGTGAAACCAGTGGCTGAGAAAGTTTCTCAAGATTATGGACTGCCTTCATTCCTTGCTGCACCAAAACTGGACCTAACCACTGAAGATAAGAACACTAGAAAGAGTTGTAAAGAACTGGACTTGAATGGATTCAGTTGGAACTAA 1185 0.4295 MYTHLQHQGKNIHSSSRMPIPSERHMFLHTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNATHKICINPGAATDERLRENNGTHVNNLNLAPQSNNKDLHISEALQMQIEVQRRLNEQLEVQRLLQLRIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKVSSQCLNSAFLELKELQGFSPHQTQTNQPNDCSMDSCLTSCEVSQKEQEIQNGGMNLRPFNVHTFMERKEVIEGPNLNNLPNTDLKWCDPVKNTFLTPLSRRSPSNLSMSIGLEGETENGSTIRKESVKPVAEKVSQDYGLPSFLAAPKLDLTTEDKNTRKSCKELDLNGFSWN 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01036 394 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Phco9g01036 394 FunFam Myb family transcription factor 45 103 - -
Phco9g01036 394 Pfam MYB-CC type transfactor, LHEQLE motif 150 196 IPR025756 -
Phco9g01036 394 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Phco9g01036 394 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Phco9g01036 394 MobiDBLite consensus disorder prediction 327 348 - -
Phco9g01036 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Phco9g01036 394 Coils Coil 152 172 - -
Phco9g01036 394 Gene3D - 45 103 - -
Phco9g01036 394 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 277 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01036 Phco-Chr9 8890987 8893428 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco9g01036 Myb_DNA-binding 2.5e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01404 10 36658196 36660724 Phco9g01036 9 8890987 8893428 PCT