Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01032 ATGGCGGGCCAAAGAGTTGGAGAAACGGGTCTGTCTGAGTCAGGACCTTCAAGTCACCATGTCCCTTATGGAGTTCTTCATGGGATTAATACCTCAGCATCAGGGCTAATGAATCAAGGGTCGGCTTTTGATTTTGGAGAGCTGGAAGAGGCTTTTGCTCTGTCAGGAATTAAGATAAGAAGTGATGAAGCCAAATCATCTTTATTCACAGGCAGGCCTTCAGCCACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACCCCAATAGGAGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGATCAGGAGTAAACACTCTTTCAAGCAAAACCGAGCTCCAATTTGAAACAGAATCTCCCATAAGCATAAAAGCATCTTCTTCAGATCATCAACAGGCTTTTGATCAGCTTCAACAACAACAGGAGACAGCAACTGATGCCTCAAGAGCAGGCACATCACAGACTCAATCAGCAGTCAAATCACCACAAGAAAAGAGGAAAGGAGCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGCCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTCACACACCTTGAACAAGACCTTCAAAGAGCTCGCTCTCAGGGAGTGTTTATGGGTTGTGGTGGTGCTGGTGGAAGTATAAGTTCTGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGTTAGAAGATGACCACCGGCACATGGCGGAGCTCCGGACCGGACTGCAGGCGCCGCTCTCAGACGGCGAGCTAAGAGTGATTGTGGATGGATATCTGTCTCATTATGATGAGGTTTTCAGGCTGAAGGGGGTGGCTGCTAAAACAGATGTGTTTCATCTTATCAATGGCATGTGGACTTCACCTGCTGAGAGATGCTTCCTCTGGATAGGTGGTTTTAGACCATCAGAACTCATCACAATGTTGATGCAACAGTTGGATCCCCTAGCTGAGCAGCAATTCATGGGCATATGTGGGCTCCGCCATTCTTCAATGCAAGCAGAAGAGGCTCTCACTCAAGGTCTTGAACAGCTTCAGCAGTCTCTCGTCGACACCATCGCCGGTGGCTCCCTCGCCGATGGCGTGCAACAGATGGTGGCGGCCATGGGCAAGCTAGCCAACCTTGAAGGATTTGTTGGCCAGGCTGATAATTTGAGACAACAAACCCTTCACCAGTTATGTCGATTACTGACAGTTCGACAAGCAGCAAGATGTTTTGTTGTGATTGGAGAGTATTATGGCCGTCTAAGAGCCCTAAGTTCCCTTTGGGCATCAAGACCACGAGAGAGCTTGATGAGTGATGATAACTCATGCCAAACAACAACGGAATTGCAAATGGTTCAACCTTCTCAGAATCAGTTCTCGAATTTCTGA 1461 0.4736 MAGQRVGETGLSESGPSSHHVPYGVLHGINTSASGLMNQGSAFDFGELEEAFALSGIKIRSDEAKSSLFTGRPSATLEMFPSWPMRFQQTPIGGSKSGGESTDSGSGVNTLSSKTELQFETESPISIKASSSDHQQAFDQLQQQQETATDASRAGTSQTQSAVKSPQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGVFMGCGGAGGSISSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDGELRVIVDGYLSHYDEVFRLKGVAAKTDVFHLINGMWTSPAERCFLWIGGFRPSELITMLMQQLDPLAEQQFMGICGLRHSSMQAEEALTQGLEQLQQSLVDTIAGGSLADGVQQMVAAMGKLANLEGFVGQADNLRQQTLHQLCRLLTVRQAARCFVVIGEYYGRLRALSSLWASRPRESLMSDDNSCQTTTELQMVQPSQNQFSNF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01032 486 Gene3D - 183 231 - -
Phco9g01032 486 Pfam bZIP transcription factor 183 225 IPR004827 GO:0003700|GO:0006355
Phco9g01032 486 Coils Coil 210 230 - -
Phco9g01032 486 SMART brlzneu 180 256 IPR004827 GO:0003700|GO:0006355
Phco9g01032 486 Pfam Seed dormancy control 264 339 IPR025422 GO:0006351|GO:0043565
Phco9g01032 486 MobiDBLite consensus disorder prediction 171 186 - -
Phco9g01032 486 MobiDBLite consensus disorder prediction 82 186 - -
Phco9g01032 486 FunFam BZIP family transcription factor 183 232 - -
Phco9g01032 486 ProSiteProfiles DOG1 domain profile. 247 455 IPR025422 GO:0006351|GO:0043565
Phco9g01032 486 CDD bZIP_HBP1b-like 184 234 - -
Phco9g01032 486 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 187 202 IPR004827 GO:0003700|GO:0006355
Phco9g01032 486 PANTHER TRANSCRIPTION FACTOR TGA9 124 458 - -
Phco9g01032 486 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 226 IPR004827 GO:0003700|GO:0006355
Phco9g01032 486 MobiDBLite consensus disorder prediction 88 166 - -
Phco9g01032 486 SUPERFAMILY Leucine zipper domain 184 226 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01032 Phco-Chr9 8837758 8845024 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco9g01032 DOG1 5.7e-30 No_clan