Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g00990 | ATGTTCCAGAAGCGTTTTCGTCTTCACCTTCTCCCTGTGTCGAAGAAGCACTATCAGTTTCCGCTTCTACGTAACGCGGTTACGCTGTCCGACGGAGTTCAACAACCCTCGGACGCCACCATAGCCAAACTAGTCCTCGAATCAGACCCACTCACTCTCTCCGAGGCCCTATGCAGGCCCACGATCCAATGGGCCCCCGAGCTCGTGAACAGGGTCTTGAAGCGCCTCTGGAACCACGGGCCCAAGGCCCTTCAATTCTTCAAACACCTGGACCGCCACCCTTCCTACATCCACTGCTCCTCGTCGTTCGACCACGCCGTCGACATCGCGGCCCGTATGCACGACTACAACGCGGCATGGGCCTTAGTGGGTCGCATGCGATCCCTCCGCCGCGGCCCAACTCACCGAACGTTCGCCATCCTCGGCGAGCGCTACGCTGCGAACGGAAAACCCCACCGCGCCGTCAGAACCTTCCTCTCCATGCACGAGCACGGTTGCCGTCAGGACCTGAACTCATTCAACACCGTCCTAGACGTGCTCTGCAAATCGAAGCGCGTGGAAATGGCGCACACCTTGCTCAAGACGTTCAGATCAAGATTCAGACTCGATAGCGTGAGCTACAACATTATCGCAAACGGTTATTGCTTAATCAAACGCACGCCGATGGCGTTGCAGGTTCTGAAGGAAATGGTGCAGCGAGGGATAAACCCTACGATGGTCACGTACAACACATTGCTGAAAGGTTATTTTCGGAGTAGTCAGATTAAGGAGGCTTGGGAGTTTTACTTGGAGATGAAGAAGAGGAAGTGCGAGATTGATGTTGTGACTTACACGACTGTGATTCACGGGTTTGGGGTAGTGGGTGAGGTTAAGAAATCTCGTAGGGTTTTTGATGAGATGGTGAAGGAGGGTGTGGCTCCTAGTGTCGCCACGTGTAATGCGTTGATTCAGGTTTTGTGTAAGAAGGATAGCGTGGAGAGTGCGGTGGTGGTTTTTGAGGAGATGCTGAGGAAGGGGTTGTGTGTGCCGAATTTAGTTACTTACAACGTTGTAATCAGAGGTTTTTGTCATGTTGGTGACATGGAGAGGGCGTTAGGGTTTATGGGGAGAATGGGGGAGCATGGTTTGAGAGCTTCTGTTCAGACTTATAATGTTGTGATTAGGTACTTTTGTGATGCTGGGGAGATCGAGAAGGGTTTGGAGATGTTTGGGAAGATGAAGGATGAGCCTTGCTTGCCCAATTTGGATACTTACAATGTTCTTATTAGTGCCATGTTTTTGAGGAAGAAATCGGAGGATTTGGTGGTGGCTGGGAAATTGTTGATGGAGATGGTTGATAGAGGGTTCTTGCCGCGGAAGTTTACTTTCAATAGGGTGTTGAATGGACTTGCTATTACTGGGAATCAGGATTTTGCCAAGGAAATTCTGAGAAAGCAGAGCAGGTGTGGCCGTGTTGTTCGGCGTTTGAAATTGTGA | 1476 | 0.5102 | MFQKRFRLHLLPVSKKHYQFPLLRNAVTLSDGVQQPSDATIAKLVLESDPLTLSEALCRPTIQWAPELVNRVLKRLWNHGPKALQFFKHLDRHPSYIHCSSSFDHAVDIAARMHDYNAAWALVGRMRSLRRGPTHRTFAILGERYAANGKPHRAVRTFLSMHEHGCRQDLNSFNTVLDVLCKSKRVEMAHTLLKTFRSRFRLDSVSYNIIANGYCLIKRTPMALQVLKEMVQRGINPTMVTYNTLLKGYFRSSQIKEAWEFYLEMKKRKCEIDVVTYTTVIHGFGVVGEVKKSRRVFDEMVKEGVAPSVATCNALIQVLCKKDSVESAVVVFEEMLRKGLCVPNLVTYNVVIRGFCHVGDMERALGFMGRMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEMFGKMKDEPCLPNLDTYNVLISAMFLRKKSEDLVVAGKLLMEMVDRGFLPRKFTFNRVLNGLAITGNQDFAKEILRKQSRCGRVVRRLKL | 491 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g00990 | 491 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 203 | 237 | IPR002885 | - | |
| Phco9g00990 | 491 | NCBIfam | pentatricopeptide repeat | 311 | 343 | IPR002885 | - | |
| Phco9g00990 | 491 | NCBIfam | pentatricopeptide repeat | 205 | 238 | IPR002885 | - | |
| Phco9g00990 | 491 | NCBIfam | pentatricopeptide repeat | 346 | 378 | IPR002885 | - | |
| Phco9g00990 | 491 | NCBIfam | pentatricopeptide repeat | 382 | 414 | IPR002885 | - | |
| Phco9g00990 | 491 | NCBIfam | pentatricopeptide repeat | 172 | 198 | IPR002885 | - | |
| Phco9g00990 | 491 | NCBIfam | pentatricopeptide repeat | 275 | 308 | IPR002885 | - | |
| Phco9g00990 | 491 | NCBIfam | pentatricopeptide repeat | 240 | 274 | IPR002885 | - | |
| Phco9g00990 | 491 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 273 | 307 | IPR002885 | - | |
| Phco9g00990 | 491 | Pfam | PPR repeat | 145 | 166 | IPR002885 | - | |
| Phco9g00990 | 491 | Pfam | PPR repeat | 205 | 235 | IPR002885 | - | |
| Phco9g00990 | 491 | Pfam | PPR repeat | 172 | 195 | IPR002885 | - | |
| Phco9g00990 | 491 | Gene3D | Tetratricopeptide repeat domain | 301 | 371 | IPR011990 | GO:0005515 | |
| Phco9g00990 | 491 | Gene3D | Tetratricopeptide repeat domain | 199 | 300 | IPR011990 | GO:0005515 | |
| Phco9g00990 | 491 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 308 | 342 | IPR002885 | - | |
| Phco9g00990 | 491 | Gene3D | Tetratricopeptide repeat domain | 51 | 198 | IPR011990 | GO:0005515 | |
| Phco9g00990 | 491 | Gene3D | Tetratricopeptide repeat domain | 372 | 490 | IPR011990 | GO:0005515 | |
| Phco9g00990 | 491 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 379 | 413 | IPR002885 | - | |
| Phco9g00990 | 491 | PANTHER | TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED | 20 | 170 | - | - | |
| Phco9g00990 | 491 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 238 | 272 | IPR002885 | - | |
| Phco9g00990 | 491 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 344 | 378 | IPR002885 | - | |
| Phco9g00990 | 491 | Pfam | PPR repeat family | 237 | 284 | IPR002885 | - | |
| Phco9g00990 | 491 | Pfam | PPR repeat family | 379 | 425 | IPR002885 | - | |
| Phco9g00990 | 491 | Pfam | PPR repeat family | 307 | 357 | IPR002885 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco9g00990 | Phco-Chr9 | 8296041 | 8297516 | Dispersed |