Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00981 ATGGAGCAACAAAATCTTTCAGACACCGATCAGTTTTTGACTCTGGGCGCCACTTCGGACGAGTCACAGAGTCCTAAGGAACCAGTGACGCATGTCAACGCCGCCGCCGAAAATAACAACAATGTTGTTAGTGCAGTCAATGTTGCAACTGGTCCTGCTTCTGCTTCTGAGCTTGTTGTAGCCGTAACAAACTCCGAGGCTGTAGGTTCGGGATTGGTGGTGAAGCGAGGAAGGGGGAGGCCTCGGAAGCAAGAGGCTGTCAGGAACTCGGTGTCTCCGTTGTCTGAGGTGGCGCCGCCGCCACCAGGATTTTTCAATCAGACTAAGAGAGGCAGGGGACGCCCTCGTGGTTCTGGGAAACTGCAGGTTATGGCTTCCATTGGTGGGTTTATGCAAGAAACAGCAGGAGGAAGCTTCATACCTCACGCGCTGAGTGTGCAAATTGGAGAGAATTTGGTAGGAGCGATAATGTCCTTTTTTGAGAAAGGCCCGCTATCAGTTTGCATTCTTTCTGCTACTGGTGCTATTTCAAATGTGACCATTCGTGAACATTCTGGTTCTAATCATATTATGAGATTTGAGGGTACCTTTGAGATATTGTCTTTATCAGGAGCTTGTACCTTCGTTTGTGGCATTAATGGCCCAGTTCGTACAAGTGGATCGTTGAGAATTTCAATGGCTAAATCTGATGGAAATGTTTTTGGGGGAATCCTTGAGAGTGCATTGGTAGCATCTTGCCCTATTCAGCTTGTTATGGCCACTTTCAAGCAAACCATGAATAGTCAATTCAAGAGAAAACAATTGTTTGGATTTTCTAATGTCCCCCTTATGCTGGAAAGTCCAGATTCAGAAAGGGGTAAAATGAAAGTTCCAAAGTGGACAGAAGGTGAGAAGAGTTGTTCTTCACCACCACCAACAGGACTTGAACCAACAACAATACCTGATTGTGTAGCAGATAATGTGTTTTCTGCCACACTTAATGGAGGAACAGATAATGGTATTACTCCACACAATGTGCATTCTGCATGTTTTATTGGTGTTGATATGGACAACCAGGCTCCACAGTCTGCATCAGATGATTCAGATCAGAAGACTTCTGCAGACGTGAATGCAAATGTTATAGAATTATGA 1131 0.4518 MEQQNLSDTDQFLTLGATSDESQSPKEPVTHVNAAAENNNNVVSAVNVATGPASASELVVAVTNSEAVGSGLVVKRGRGRPRKQEAVRNSVSPLSEVAPPPPGFFNQTKRGRGRPRGSGKLQVMASIGGFMQETAGGSFIPHALSVQIGENLVGAIMSFFEKGPLSVCILSATGAISNVTIREHSGSNHIMRFEGTFEILSLSGACTFVCGINGPVRTSGSLRISMAKSDGNVFGGILESALVASCPIQLVMATFKQTMNSQFKRKQLFGFSNVPLMLESPDSERGKMKVPKWTEGEKSCSSPPPTGLEPTTIPDCVADNVFSATLNGGTDNGITPHNVHSACFIGVDMDNQAPQSASDDSDQKTSADVNANVIEL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00981 376 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 41 291 IPR039605 GO:0003680
Phco9g00981 376 ProSiteProfiles PPC domain profile profile. 136 277 IPR005175 -
Phco9g00981 376 MobiDBLite consensus disorder prediction 351 370 - -
Phco9g00981 376 MobiDBLite consensus disorder prediction 280 310 - -
Phco9g00981 376 CDD DUF296 141 255 IPR005175 -
Phco9g00981 376 PRINTS AT-hook-like domain signature 107 118 IPR017956 GO:0003677
Phco9g00981 376 PRINTS AT-hook-like domain signature 75 85 IPR017956 GO:0003677
Phco9g00981 376 MobiDBLite consensus disorder prediction 76 118 - -
Phco9g00981 376 Gene3D - 141 271 - -
Phco9g00981 376 SMART AT_hook_2 109 121 IPR017956 GO:0003677
Phco9g00981 376 SMART AT_hook_2 75 87 IPR017956 GO:0003677
Phco9g00981 376 Pfam Plants and Prokaryotes Conserved (PCC) domain 141 256 IPR005175 -
Phco9g00981 376 MobiDBLite consensus disorder prediction 351 376 - -
Phco9g00981 376 MobiDBLite consensus disorder prediction 1 31 - -
Phco9g00981 376 SUPERFAMILY AF0104/ALDC/Ptd012-like 138 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00981 Phco-Chr9 8131205 8134866 Wgd