Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00973 ATGGAGAGGAACGAGAATTACAGTTCAGAGGAGGAATGCATGGAGGATTATCGGCGTGGAGGGTACCATGCTGTTCGAATCGGCGATGCTTTCAACAATGGCCGCTACGTCGTGCAGTCCAAGCTCGGTTGGGGCCATTTTTCCACCGTCTGGCTCGCCTGGGACACTCTCAATTCGCGTTTTGTGGCCCTTAAAATTCAGAAGAGTGCGCAACATTACACTGAAGCTGCAATGGATGAAATAAAGATTCTCAAACAAATAGCTGAGGGGGACCTGGATGATAAGAAATGTGTTGTGAAACTTTTGGATCATTTTAAGCATTCGGGGCCTAATGGACAGCATGTCTGTATGGTTTTCGAATTCCTGGGTGACAATCTTCTCACCCTTATTAAATATACTGACTATCGTGGGGTTCCTCTCCACATGGTTAAAGAAATCTGTTTTCATATTTTGGTGGGCTTAGATTACTTGCATCGTGAGCTTTCTGTTATACACACTGATTTGAAGCCAGAAAATGTGTTGCTTCTGTCACTGATAAATGCATCCAAAGATCCTAGGAAATCGGGTGCTTCACTCATCCTTCCTAATACAAAGGATAAGGCTGCGTCTAATAATGGGACTCACCAAGACAATAAAATTTTGAATGGAGATCCACTGAAGAACCAGAAAAGGAAAATGAAGAGGAAGGCTAAGGTAGCTCAAGGCTTTGTTGGGAAGGAAACTTCAGAGGAAGCTGAGGATTATAAAGGGCCCGAGCAAGAAGATTGTGGGAATGATGTAAAATCAAGTGTAGAATCTGTTGAAGATAAACCTGATAGTTCTTTGAGTAAAGATGAATCAACAAAGACTTTTGAAAAGGATGTTTCACAAGGAAGTCATAGTCATATGAGTAGCAGCCGTTCCATGAAAAAGAAGTTGCTGGCAGCTGTTGATCTTAGGTGCAAGCTGGTTGATTTTGGTAGTGCTTGTTGGACTTATAAACAATTCACAAATGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCCAAATACTCAACCCCAGCAGATTTGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTGCCACCGGTGATGTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGACCATTTGGCATTGATGATGGAGCTTCTCGGGAAGATGCCTCCGAAGATTGCACTAGGTGGCCGCTATTCTCGAGAATTTTTCAATAGACATGGTGACTTGAGGCACATCAGCAATTTGAGATTCTGGCCAATGAATAAGGTGCTGATGGACAAGTATAATTTCAGCGAGCAAGACACAAAGGACATGGTTGATTTCCTTGTTCCAATGCTTGATTTCGTCCCAGAAATGAGACCAACTGCTGCTCAGTGCCTTAGTCATCCATGGATGAGTGTAGGTCCTCGTACTCTTCAGCCCTCAATACCTACCGCTCAACCTGATGCCATGAATGAGGAATTGTCTGAAAGAAGGAAGAGGGAAGCTTCTGAAAAGGAGTCAGTGGAAATTGGTTTGAGGAACATAGCCATTAAAGGAACTTCTGAGCCTCTCAAAGACTCCCAACCTCTAAAATCATCCAAATAG 1614 0.4318 MERNENYSSEEECMEDYRRGGYHAVRIGDAFNNGRYVVQSKLGWGHFSTVWLAWDTLNSRFVALKIQKSAQHYTEAAMDEIKILKQIAEGDLDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYTDYRGVPLHMVKEICFHILVGLDYLHRELSVIHTDLKPENVLLLSLINASKDPRKSGASLILPNTKDKAASNNGTHQDNKILNGDPLKNQKRKMKRKAKVAQGFVGKETSEEAEDYKGPEQEDCGNDVKSSVESVEDKPDSSLSKDESTKTFEKDVSQGSHSHMSSSRSMKKKLLAAVDLRCKLVDFGSACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGKMPPKIALGGRYSREFFNRHGDLRHISNLRFWPMNKVLMDKYNFSEQDTKDMVDFLVPMLDFVPEMRPTAAQCLSHPWMSVGPRTLQPSIPTAQPDAMNEELSERRKREASEKESVEIGLRNIAIKGTSEPLKDSQPLKSSK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00973 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Phco9g00973 537 MobiDBLite consensus disorder prediction 190 300 - -
Phco9g00973 537 MobiDBLite consensus disorder prediction 197 216 - -
Phco9g00973 537 Gene3D Phosphorylase Kinase; domain 1 12 118 - -
Phco9g00973 537 SUPERFAMILY Protein kinase-like (PK-like) 31 486 IPR011009 -
Phco9g00973 537 MobiDBLite consensus disorder prediction 494 511 - -
Phco9g00973 537 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 7 496 - -
Phco9g00973 537 CDD STKc_SRPK 25 474 - -
Phco9g00973 537 SMART serkin_6 36 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00973 537 ProSitePatterns Protein kinases ATP-binding region signature. 42 65 IPR017441 GO:0005524
Phco9g00973 537 ProSiteProfiles Protein kinase domain profile. 36 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00973 537 Gene3D Transferase(Phosphotransferase) domain 1 119 475 - -
Phco9g00973 537 MobiDBLite consensus disorder prediction 240 289 - -
Phco9g00973 537 FunFam CMGC/SRPK protein kinase 22 121 - -
Phco9g00973 537 MobiDBLite consensus disorder prediction 480 537 - -
Phco9g00973 537 FunFam Serine/threonine-protein kinase SRPK-like protein 304 474 - -
Phco9g00973 537 Pfam Protein kinase domain 36 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00973 537 Pfam Protein kinase domain 311 474 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00973 Phco-Chr9 8000947 8004684 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Phco9g00973 Pkinase 1.1e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01455 10 37201011 37205852 Phco9g00973 9 8000947 8004684 PCT