Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00969 ATGTCTCGTCGAGGAAACCAATCCGATTCTAACCGTCCGCCGCACTCCTCCGCTCCTTCTCCCGCTGCCGGAGGCCGGGGCCGGGGCCGGGGTCGTGGTCGCGGCCGTGGCCGCGGTGAACATTCCGCTCAAACATCGTACTCTCCTTCCCCTGCGCACACTTCATACGCGGTTTCTCCGGCTCCTTCCACTGCCGCTCCTCCCCGTACTGTGGCAGCCGTCCCTACATCGGCGCCGCCTGGTCCATCCATCCCTCCTCCGGTACAATCCTCGCCGGCACCAGTTTCTGGATCAGCGGCAGAAGTTGCTACGTCGGCGCGGTCTCCGGCGGTAGAATCTCTTAGTTCGACGCTCGAGAAGCAACTGACATTGGCGTCATCGGTCTCGTCGTCGTCAGCACCGTCGTCGTCAAAGGCTGTGAGATTCCCGGACCGGCCAGGATTCGGAAGAGCGGGAAAGAGGATCCAAGTGCGCGCGAATCATTTTCAAGTGCAAGTTGCGCAGAATGATATTTATCACTACGATGTGACGATCTCTCCGGAGATCATTTCAAAGAAGATTTCCAGAGATGTTATCGGCTTGCTGGTCCAAGCCCACCGCGAATCTATCTTAGCTAATCGTGTGCCGGCGTATGATGGACGAAAAAGTCTTTTTACATCTGGACCTTTGCCATTCGAATCTAAGGATTTTAAGGTCAAGTTAGGGGATGAGGATGGACCAGGGTCTTCTGCCACTCCTGCATCTGCTAGAAATAAACGTGAACGCGAGTTTAGGGTCTCAATCCGATTTGCTTCGAAGACTGACCTTCATCACCTTGTTCAGTTTCTTAGTCGCCGTCAGTTGGACTGTCCTCAGGAAACTATTCAGGCTCTTGATGTTGTTCTGCGGGCTACACCTTCTGAAAAGTTTGATGTGGTTGGAAGATCCTTCTTTTCTCCTGCATTGGGACCAAAAGGACCGTTGGGTAGTGGAACTGAATTTTGGCGAGGGTATTACCAGAGTCTTCGCCCAACTCAGATGGGCCTGTCTCTTAATATTGATGTGTCGGCGAGAGCATTTTATGAGGCCATTCCTGTCCTTGATTTCATTTCGAAGCATTATAGACTTGATCTTCGAAGGCCTTTGCATGATCAGGATCGAGTAAAGATTAAGAGAGCTTTGAGAGGAGTCAAGGTACAAGTTAATCATGGACAGAATATCAGACGTTACAAAGTGACTGCAGTCACAAAAGAACCCCTCAGAGGCTTAATGTTTACTCTTGATGACAATGGAACAAGAAAGTCAGTTATTCAGTATTTCCAAGAGAAATATGATATTTCTTTGCAGTATACACAGCTTCCTGCTCTTCAAGCTGGTTCCGACACCAATCCAATTTTTTTGCCTATGGAGCTTTGTACAATCGTGGCTGGACAGAGATATACCAAGAAGTTGAATGAGGGTCAAGTAACTGCTCTTTTAAAGGCAACTTGTCAGCGTCCTCATGATAGGGAAAACTCCATCAGACAGGTTGTGAGACAGAGCAATTTTAGTGCTGACAAATTTGCTCGGGACTTTCAAATTCGAGTTAGGGAGGATCCAATTTTGCTAGATGCTCGTGTCTTGCCTCCCCCTATGCTTAAATACCATGGATCAGGTGGCGAGTCACAGGTTCAACCAAGGATGGGTCAGTGGAATATGATTAACAAGAAAGTGATTATTGGTGGTGCTGTTGAACACTGGACTTGCCTCAACCTTTCTGGAAGAATATCCAGAGATCTACCATTTCAACTTTGTCAGAATTTGGCTGAAATGTGTAACAGCAAGGGAATGCGTTTTAAAGGAACTCCTGTAATACCTATAACAACAGCTTCAAGTGGTCAAATGGAGAATGCCCTTAAGAACCTGCATAAGCAGTGTATGGAGACTGGAGGACTCCAATTGTTGATCATAATTTTACCTGATGTCAAGGGGTCTTATGGGAAAATTAAGCGCATTTGTGAAACTGAACTGGGAATAGTATCCCAGTGTTGTCAGCCTAATCAAGTGATGAAAATGAATAAACAATATCTTGAAAATCTGTCCCTCAAGATAAATGTGAAGGTTGGTGGTACGAACACGATATTGAATGATGCATTTGCGAATAAAATACCTCATGTCTCTGATACACCGACAATTATCTTTGGAGCAGATGTAACACACCCCCAACCAGGGGAGGATGCCAGTCCTTCTATTGCTGCAGTTGTGGCTTCCATGGATTGGCCTTACGTAACAAGGTATAGAGGAGTTGTTTCTGCTCAGAAACATCGGGAAGAAATTATTCAAGATCTTTTCATTGAACGTGAAGATCCGGTGAAGGGAATTGTACATTCAGGAATAATCAGGGATTTGTTTCGTGCTTTTCGGATTTCAACTAATCGTAAGCCAGAAAGGATTATATTCTACAGAGATGGTGTGAGCGAGGGCCAATTTAATCAAGTGCTACTTTATGAGATGGATGCCATAAGACGGGCCTGTAGCTCATTACAAGCCGACTATTTACCGCCTGTTACTTTTGTGGTGGTTCAGAAGAGGCACCATACCCGGTTGTTCCCTGCGGATCACAGAGCTCGTGATAGTATGGATAGAAGTGGAAATATAATGCCAGGGACTGTAGTTGACACAACCATATGTCATCCCCGGGAGTTTGATTTTTACCTGAATAGTCATGCTGGAATTCAAGGAACAAGCCGACCAACTCATTATCATGTATTGTTCGATGAAAATAAATTTACTGCTGATGAGTTGCAGAGTTTAACCAATAATTTGTGTTATACGTATGCAAGATGTACTCGATCAGTTTCTATAGTTCCTCCCGCGTATTATGCCCATTTGGCCGCATTCCGTGCACGCTATTACATAGAAGGTGATACATCAGAATCTGGTTCTGCAACTGGAGGCAGGGGTGGTTTCGCCAACTTTGAGGTTAAATTGCCCTCGGTGAAGAGTAATGTCTCGGACGTGATGTTTTTCTGTTGA 2994 0.4603 MSRRGNQSDSNRPPHSSAPSPAAGGRGRGRGRGRGRGRGEHSAQTSYSPSPAHTSYAVSPAPSTAAPPRTVAAVPTSAPPGPSIPPPVQSSPAPVSGSAAEVATSARSPAVESLSSTLEKQLTLASSVSSSSAPSSSKAVRFPDRPGFGRAGKRIQVRANHFQVQVAQNDIYHYDVTISPEIISKKISRDVIGLLVQAHRESILANRVPAYDGRKSLFTSGPLPFESKDFKVKLGDEDGPGSSATPASARNKREREFRVSIRFASKTDLHHLVQFLSRRQLDCPQETIQALDVVLRATPSEKFDVVGRSFFSPALGPKGPLGSGTEFWRGYYQSLRPTQMGLSLNIDVSARAFYEAIPVLDFISKHYRLDLRRPLHDQDRVKIKRALRGVKVQVNHGQNIRRYKVTAVTKEPLRGLMFTLDDNGTRKSVIQYFQEKYDISLQYTQLPALQAGSDTNPIFLPMELCTIVAGQRYTKKLNEGQVTALLKATCQRPHDRENSIRQVVRQSNFSADKFARDFQIRVREDPILLDARVLPPPMLKYHGSGGESQVQPRMGQWNMINKKVIIGGAVEHWTCLNLSGRISRDLPFQLCQNLAEMCNSKGMRFKGTPVIPITTASSGQMENALKNLHKQCMETGGLQLLIIILPDVKGSYGKIKRICETELGIVSQCCQPNQVMKMNKQYLENLSLKINVKVGGTNTILNDAFANKIPHVSDTPTIIFGADVTHPQPGEDASPSIAAVVASMDWPYVTRYRGVVSAQKHREEIIQDLFIEREDPVKGIVHSGIIRDLFRAFRISTNRKPERIIFYRDGVSEGQFNQVLLYEMDAIRRACSSLQADYLPPVTFVVVQKRHHTRLFPADHRARDSMDRSGNIMPGTVVDTTICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENKFTADELQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGDTSESGSATGGRGGFANFEVKLPSVKSNVSDVMFFC 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00969 997 Gene3D - 533 703 - -
Phco9g00969 997 SMART Piwi_a_2 640 960 IPR003165 GO:0003676
Phco9g00969 997 MobiDBLite consensus disorder prediction 73 92 - -
Phco9g00969 997 Pfam PAZ domain 361 484 IPR003100 GO:0005515
Phco9g00969 997 Pfam N-terminal domain of argonaute 153 295 IPR032474 -
Phco9g00969 997 SUPERFAMILY Ribonuclease H-like 625 960 IPR012337 -
Phco9g00969 997 SUPERFAMILY PAZ domain 352 509 IPR036085 GO:0005515
Phco9g00969 997 ProSiteProfiles PAZ domain profile. 357 469 IPR003100 GO:0005515
Phco9g00969 997 CDD Piwi_ago-like 513 959 IPR045246 -
Phco9g00969 997 Pfam Argonaute linker 2 domain 495 541 IPR032472 -
Phco9g00969 997 SMART PAZ_2_a_3 357 494 IPR003100 GO:0005515
Phco9g00969 997 MobiDBLite consensus disorder prediction 1 106 - -
Phco9g00969 997 Gene3D paz domain 351 473 - -
Phco9g00969 997 MobiDBLite consensus disorder prediction 1 17 - -
Phco9g00969 997 MobiDBLite consensus disorder prediction 234 253 - -
Phco9g00969 997 MobiDBLite consensus disorder prediction 126 147 - -
Phco9g00969 997 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 134 961 - -
Phco9g00969 997 Pfam Argonaute linker 1 domain 306 355 IPR014811 -
Phco9g00969 997 CDD PAZ_argonaute_like 356 468 - -
Phco9g00969 997 Gene3D - 709 997 IPR036397 GO:0003676
Phco9g00969 997 Pfam Piwi domain 641 959 IPR003165 GO:0003676
Phco9g00969 997 ProSiteProfiles Piwi domain profile. 640 960 IPR003165 GO:0003676
Phco9g00969 997 MobiDBLite consensus disorder prediction 41 61 - -
Phco9g00969 997 FunFam protein argonaute 10-like 708 997 - -
Phco9g00969 997 SMART DUF1785_2 304 356 IPR014811 -
Phco9g00969 997 FunFam Argonaute 10 533 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00969 Phco-Chr9 7966614 7972277 Dispersed/Transposed