Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00937 ATGCCATCATCACTATCCTCTTTCCTCCATATGATTCATGTTCTCTCCCTTCTTGTACTCTCATGTATGATTTATTCTGGTTGTGCTCAGGGACCACCTTCACCTGGCTACTACCCCAGTTCCAAAATTAGTCCTGTTAGCTTTAATCAAGGGTTTAAAAACCTTTGGGGACCTCAGCATCAGAGAATAGACCAAGGCTCATTGACAATATGGCTAGACACTAGCTCAGGGAGTGGATTTAAGTCACTTCACTCTTATAAGTCTGGATACTTTGGTGCTGCAATTAAGCTTCAACCTGGTTATACTGCAGGAGTCATTACATCTCTCTACCTTTCAAACAACCAAGACCACCCCGGAAACCACGATGAAATTGACATAGAGTTCCTAGGTACGACGCCAGATAAGCCATATGTCTTGCAGACAAATGTATACATCAGAGGAAGTGGAGATGGGAATATTATAGGAAGAGAAATGAGGTTTCATCTCTGGTTTGACCCCACACAGGATTTTCACAACTATGGCATTCTATGGAAACCCGCTGAGTTAATATTTTTTGTGGATGATGTCCCAGTAAGAAGGTATCCAAGGAAAAGTGAGGCCACATACCCTTCAAGGCCAATGTATGTGTATGGGTCAATATGGGATGCATCTGCTTGGGCAACAGAGGGTGGAAAATACAAAGCTGATTATAAATACCAACCCTTCGTTGGTAGGTACAAAAACTTCAGACTTCAAGGTTGCACTAGTGAAAGCTCTGCCTCATGCAGACCACCTTCTGGCTCTCCATCTGGCTTTGGAAGTCTGAGCCCTCAGCAGTTTAGGGCCATGCAATGGGTCCAAAACAACTACATGGTGTACAACTATTGCCATGATCCTAGGAGAGACCACAATCTGATCCCAGAATGCTAA 909 0.4367 MPSSLSSFLHMIHVLSLLVLSCMIYSGCAQGPPSPGYYPSSKISPVSFNQGFKNLWGPQHQRIDQGSLTIWLDTSSGSGFKSLHSYKSGYFGAAIKLQPGYTAGVITSLYLSNNQDHPGNHDEIDIEFLGTTPDKPYVLQTNVYIRGSGDGNIIGREMRFHLWFDPTQDFHNYGILWKPAELIFFVDDVPVRRYPRKSEATYPSRPMYVYGSIWDASAWATEGGKYKADYKYQPFVGRYKNFRLQGCTSESSASCRPPSGSPSGFGSLSPQQFRAMQWVQNNYMVYNYCHDPRRDHNLIPEC 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00937 302 SUPERFAMILY Concanavalin A-like lectins/glucanases 47 302 IPR013320 -
Phco9g00937 302 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 47 302 IPR044791 GO:0004553
Phco9g00937 302 Gene3D - 28 302 - -
Phco9g00937 302 FunFam Xyloglucan endotransglucosylase/hydrolase 35 302 - -
Phco9g00937 302 PIRSF EndGlu_transf 5 302 IPR016455 GO:0010411|GO:0016762|GO:0042546
Phco9g00937 302 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 39 239 IPR000757 GO:0004553|GO:0005975
Phco9g00937 302 Pfam Glycosyl hydrolases family 16 49 231 IPR000757 GO:0004553|GO:0005975
Phco9g00937 302 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 267 302 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00937 Phco-Chr9 7607559 7609202 Dispersed/Transposed