Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00931 ATGGGAAGAGCTCCATGTTGTGACAAGGCAAGTGTTAAGAAAGGGCCATGGTCACCCGAAGAAGACACAAAGCTGAAGGAGTACATAGAGAAGCATGGAACTGGAGGGAATTGGATTGCTCTTCCTCAGAAAGCTGGTCTTAGGAGATGTGGTAAGAGTTGCAGATTGAGATGGCTCAACTATCTCAGGCCCAACATTAAGCATGGAGATTTCTCAGACGAGGAAGACAGAATAATTTGCAGCCTCTATGTTAATATTGGAAGCAGGTGGTCAATTATAGCTGCTCAGTTACCAGGAAGGACCGACAATGATATCAAGAACTACTGGAACACCAAGTTGAAGAAAAAGCTCATGGGGTTGCTTCCTCTTTCCCATCACAGAAAACAACTTTCATTTCCATCCTCTACCCTTCAAAACCCTCCACCCTCTCCTTCGTCCCACCAACTGTACGGAGAGTACGGCACCTACATCCCGGTAACAACATCTTTCACAGGCATGGAACATCTTTCCCTTCCTTCAGCTAACTATGAAAGCACAACAACCTCAGTTTCTCAAACCTTTTACCAAAACCAAGACTCCATGGCTAGCGTTAGTCCCATGCAATGCTATTACCCTATCAGTGACAGCATGCTCATATTTGGAAGCGAAGGAAGTTGCAGTTCCTCCGATGGAAGCTGCACTCAGGGAAGAGAAATCAAGCTAGAAGAAATCGGGTACCACAGCTACAACCATAACTTGATGCTTAGTTACAACAATAACAACACTAACGATGGAGACAACTCATGTGTCGGAGGGTGCTTCAGCCAAACGCAAACACCGTTGGATTATGATCTTGAGGATATTAAGCAATTGATTAGTAGCACTAGCAGCAGCTTCAATAATAATGTTGATGAAAACAAGACAGAAGAGAAGGCGATGTACTGCTGCTACTACTAG 936 0.4444 MGRAPCCDKASVKKGPWSPEEDTKLKEYIEKHGTGGNWIALPQKAGLRRCGKSCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGLLPLSHHRKQLSFPSSTLQNPPPSPSSHQLYGEYGTYIPVTTSFTGMEHLSLPSANYESTTTSVSQTFYQNQDSMASVSPMQCYYPISDSMLIFGSEGSCSSSDGSCTQGREIKLEEIGYHSYNHNLMLSYNNNNTNDGDNSCVGGCFSQTQTPLDYDLEDIKQLISSTSSSFNNNVDENKTEEKAMYCCYY 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00931 311 FunFam Transcription factor MYB36 70 139 - -
Phco9g00931 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Phco9g00931 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Phco9g00931 311 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Phco9g00931 311 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Phco9g00931 311 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Phco9g00931 311 Gene3D - 7 68 - -
Phco9g00931 311 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Phco9g00931 311 Gene3D - 70 136 - -
Phco9g00931 311 FunFam Transcription factor RAX3 7 68 - -
Phco9g00931 311 PANTHER OS09G0431300 PROTEIN 1 285 - -
Phco9g00931 311 SMART sant 67 115 IPR001005 -
Phco9g00931 311 SMART sant 13 64 IPR001005 -
Phco9g00931 311 CDD SANT 16 62 IPR001005 -
Phco9g00931 311 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00931 Phco-Chr9 7539139 7540758 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco9g00931 Myb_DNA-binding 6e-15 CL0123