Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00926 ATGGTGTCCGAGGCTAGCAAGAAAAAGGCTGCACAGAAGAAGGCCGCCGCCGCCGCTAAAAGAGGTGGAAAGGCCGCCGCCGCTGCCGTCGTCGCCGCTGCTTCTTCCAAAGCCGCCGAGAAGGCCGCTAACGGAATTGCTGATATGCATATATCGGATCGGACCTGCACTGGAGTCCTCTGTTCACATCCTCTTTCTAGAGATATTCGAATAGAATCTCTATCTGTTACGTTCCATGGTCATGATCTCATTGTTGATTCTGAACTGGAGCTTAATTATGGAAGGCGTTATGGTTTACTTGGATTAAATGGATGTGGAAAATCTACACTGCTTACAGCCATTGGTCATCGGGAACTTCCAATTCCTGACCATATGGATATCTATCACCTTACCAGGGAGATTGAAGCCTCTGACATGTCTGCACTGGAAGCTGTAATAAGCTGTGACGAAGAAAGGTTGAAATTGGAGAAAGAAGCTGAACTTTTGGCTGCACAGGATGATGGAGGCGGTGAATCCCTGGAACGTGTTTATGAGCGACTGGATGCCCTAGATGCAGCAACTGCAGAAAAGCGTGCTGCAGAAATCTTACATGGTCTTGGCTTTGACAAGCAAATGCAGGCAAAAAAGACACGTGATTTTTCTGGTGGTTGGAGAATGAGAATTGCATTAGCACGAGCCCTATTTATGAACCCAACCATTCTTCTACTCGATGAACCAACCAATCATCTTGATTTGGAAGCTTGTGTGTGGCTGGAGGAGAGTTTGAAGAAGTTTGAACGTATTCTGGTTGTGATTTCACACTCGCAGGACTTTCTAAATGGTGTCTGCACAAATATAATCCACATGCAAAGCAAAAAACTGAAGCTCTATACTGGTAACTATGATCAATATGTTCAGACACGTTCTGAGCTAGAAGAGAATCAGATGAAACAGTATAAGTGGGAGCAGGAGCAGATTTCCTCAATGAAGGAATATATAGCTCGATTTGGTCATGGTTCTGCAAAGCTAGCTCGCCAGGCACAGAGTAAGGAGAAAACATTGGCAAAAATGGAACGTGGTGGACTTGCAGAAAAGGTGGTCAGGGACAAGGTTTTGGTATTTCGTTTTACTGATGTTGGAAAACTCCCCCCTCCTGTTCTCCAGTTTGTTGAGGTGGCATTTGGTTACACTCCCGATAACCTCATATACAAGAACATTGACTTTGGGGTTGATTTAGATTCTAGGGTCGCACTGGTTGGACCCAATGGTGCTGGGAAGAGTACACTACTGAAGCTAATGACAGGTGATTTGATGCCTAGTGATGGCATGGTTAGGCGTCATAATCATCTTCGGATTGCTCAATATCACCAGCATTTGGCTGAAAAGCTAGACTTGGATATGTCTGCTCTACAGTACATGATTAGAGAATATCCTGGAAACGAGGAAGAGAAGATGAGGGCAGCGATTGGAAAGTTTGGTCTATCAGGTAAAGCCCAGGTGATGCCAATGAAGAACTTGTCTGATGGGCAGAGGAGTCGAGTGATATTTGCTTGGTTAGCTTGGAGGCAGCCGCAAATGCTTCTTTTGGATGAACCAACTAATCATTTGGATATTGAGACAATTGATTCTTTGGCTGAGGCATTGAATGAATGGGACGGTGGCTTGGTTCTTGTCAGCCATGATTTCAGGCTCATAAATCAGGTGGCCCATGAAATATGGATATGTGCTAATCAAAGTGTGACTAGATGGGAGGGTGACATTATGGAATTCAAGGCGCATCTAAAGGCCAAGGCTGGTTTATCTGATTAA 1788 0.4491 MVSEASKKKAAQKKAAAAAKRGGKAAAAAVVAAASSKAAEKAANGIADMHISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGHRELPIPDHMDIYHLTREIEASDMSALEAVISCDEERLKLEKEAELLAAQDDGGGESLERVYERLDALDAATAEKRAAEILHGLGFDKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEESLKKFERILVVISHSQDFLNGVCTNIIHMQSKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQISSMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLAEKVVRDKVLVFRFTDVGKLPPPVLQFVEVAFGYTPDNLIYKNIDFGVDLDSRVALVGPNGAGKSTLLKLMTGDLMPSDGMVRRHNHLRIAQYHQHLAEKLDLDMSALQYMIREYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPQMLLLDEPTNHLDIETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWICANQSVTRWEGDIMEFKAHLKAKAGLSD 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00926 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 309 IPR003439 GO:0005524
Phco9g00926 595 Gene3D - 345 593 IPR027417 -
Phco9g00926 595 Pfam ABC transporter 396 527 IPR003439 GO:0005524
Phco9g00926 595 Coils Coil 287 307 - -
Phco9g00926 595 FunFam Abc transporter f family member 1 69 333 - -
Phco9g00926 595 ProSitePatterns ABC transporters family signature. 213 227 IPR017871 GO:0005524|GO:0016887
Phco9g00926 595 SMART AAA_5 93 295 IPR003593 GO:0016887
Phco9g00926 595 SMART AAA_5 405 593 IPR003593 GO:0016887
Phco9g00926 595 FunFam ATP-binding cassette sub-family F member 3 340 594 - -
Phco9g00926 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 316 IPR027417 -
Phco9g00926 595 CDD ABCF_EF-3 380 571 - -
Phco9g00926 595 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 574 IPR027417 -
Phco9g00926 595 Pfam ABC transporter 87 241 IPR003439 GO:0005524
Phco9g00926 595 CDD ABCF_EF-3 69 286 - -
Phco9g00926 595 Pfam ABC transporter 280 356 IPR032781 -
Phco9g00926 595 Gene3D - 69 333 IPR027417 -
Phco9g00926 595 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 380 595 IPR003439 GO:0005524
Phco9g00926 595 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 15 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00926 Phco-Chr9 7358887 7361766 Dispersed/Transposed