Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00910 ATGATTAGTATAAAGAGCGTTGAGTTGATTAGGTTTTGTTCACATCAAAGTTGTTTGGTTAACCAAGCAAAAACCATGGCTTCTAAAACCCCACTTCCTCTTCAACCCACCAACACAAAGCTACCATCTCTAAGGTCAAAGAAAGATCGCCACACCAAGGTGAATGGCAGAGAACGACGTGTTCTTTTGCCACCTTTGTGTGCTGCTCGCATCTTCCAACTCACTCGTGAGCTAGGTTACAAGACTCAAGGAGAAACCATAGGGTGGCTTTTACGCCAGGCTGAACCCTCCATTATTTCTGCAACTGGCACTGGGATATCACCTTCCATGGTTGATGTAACATCATCGTCACCATCTTCATCGTCACCATCGTCACTGCCCATACTTCCACTACCTTCTGAGGGTGACAACGTTGTTGGTCAACATGCAAATTCGGTACATTTGTCAACAGACAACGAGATCAATTCAAAAGAGACGTTTCTGCCATTCGATTTTGATATGTTCGCAAACTTTAATGTGGAATTTTCTGCTACTGAGATCGAAATGCTCCAATCATTGATGACGAGGCTTATTTCTCTCTCACTCACTTTTGCAAAAATCTCTCTCTCATTTAATTTCACCCATCTCCGTTGTCACACCGACAACTCCCTCCTTCGTCGTGTCAACAACTCCCTCCTTGTCGTGCTACCATCCCCCTCCGTGCCTCCCCCTTCCCTCTTCCCTCGCATGTCATGTATTGCATTTAACTCAACCTGA 756 0.4497 MISIKSVELIRFCSHQSCLVNQAKTMASKTPLPLQPTNTKLPSLRSKKDRHTKVNGRERRVLLPPLCAARIFQLTRELGYKTQGETIGWLLRQAEPSIISATGTGISPSMVDVTSSSPSSSSPSSLPILPLPSEGDNVVGQHANSVHLSTDNEINSKETFLPFDFDMFANFNVEFSATEIEMLQSLMTRLISLSLTFAKISLSFNFTHLRCHTDNSLLRRVNNSLLVVLPSPSVPPPSLFPRMSCIAFNST 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00910 251 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 144 IPR005333 GO:0003700
Phco9g00910 251 Pfam TCP family transcription factor 46 142 IPR017887 -
Phco9g00910 251 MobiDBLite consensus disorder prediction 29 54 - -
Phco9g00910 251 ProSiteProfiles TCP domain profile. 47 101 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00910 Phco-Chr9 7162281 7164550 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco9g00910 TCP 2e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01490 10 37636622 37637143 Phco9g00910 9 7162281 7164550 PCT