Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00902 ATGGGAAGTCTTGTACTTGTCCACAAAATTATGCTTCATGTTTGGTTTGCTGCTTGGATGAGCTTAGGCGTGTGTTCTGCTTACGACCAAAATAATTGTATTTCAAATGAAGTTGGGCTAGGGACAAGGTACAGCTGCAAGTCAACGCAGGATTCATGCCAAACATTCTTGGTGTATAGAGCTAACAAAAATTTCAATACCATTTCTAATGTCTCAAAGCTCTTCAACAAGAGCTCTGATGAGGTGCTTCTAAAGAACAACCTCGTATCTTCCTCTTTGTCCCTTGTACTCAAACAAGGTAAGGAGGTGCTTATTCCTGTTAATTGCACCTGCTCTGGCACGTATTATCAAACCAGTTTAAGCTATAAAGTCCTTGACAACACAACATTTTCCGAGATTGCTTGTGGTGTTTTTGAAGGGCTGCTCAGTCATCTTACACTGGCTGAGGAAAACCTGTCACAAGGTAATAAACCAGAAGCTGGTGCTGAGCTTCATGTGCCTCTCATATGTGCTTGTCCTGACAGTGAGAATTTTACCTGGAGCAAGAAGGTAAAGTACCTTGTCACGTACCCTCTTATAAGGGGAGACGATCCTGACAAAGTGAGTGAAAAATTTCAAATCTCACCAGAAGAGTTTTATGCAGTCAATGACTTGAATTCCCTGTCAACTGTTTATCCTAACACAGTTCTTATAGTTCCATTAGAGGATGGTCCAATCAGAATACTGGATATTCCTGACTCTCCTTCTCCACCTCCAGGTTTTCTTCCTACAAATCCAGTGGGTAAGACACAAGAATACGCACAACCATCAAATTTTTACATTGCAGGATCTGTTATCGGATTTTTGTTGCTCATAACATTGCTTGCAAGCGGATTTTACATAAAGAGACTGAGAAAAAGTGATGTTGTCCTTTCCTTCAGTCCGACCAACTCCCTCACTTTGTGGTCACCAACTAGAAGCTCTCCGATATCTACACAAACGACTAAAAGCAATACAACTTGGTGCCTGTCCCCAGATCTTCTTGTTGGAATAAAGTACTACTTACTCAATTACACCATAGAGGAGCTCCAGAAGGGAACCAAGAATTTCAGTTTAGAAAACAACATCAGTGACGAAGGTGACTTTGTCTACAAGGGAACAGTCAATGATCTTGAGGTGATGGTAAAGAGGATGAGGTTGGAAGACACACGCCAGGTGATTGATTTACATTCTAAAATGAACCACATTAATATTGTGAACTTGATTGGTGTTTGTTATGGTGAGAGCAATGATCCATGGTCTTATTTAGTCTTTGAGTTGCCTAAGAATGGATGCTTGAGGGACTGCTTATCTGATCGATGCAATCCGCTAAATTGGTACAAACGGACACAAATAGCCTTTGATATTGCGACATGTCTCTACTATTTACATTGCTGTTCTTTTCCTTCCTATGCTCACATGAATGTCAGTAGTAGAAACATATTCATAACAGCCAACTGTAGGGCTAAACTGGCAGATGTTGGAAGAGCATTGGCTGCCACTGCCACACTCACCAAAAGCAATGATAGTATGGAGATTCCCAAAGGATTGGTGGCACCAGAGTTCCTCTCACATGGCTCAGTTTCTGAAAAGGTTGACATTTTTGCATTTGGGGTTGTGTTGCTTGAGCTGATCTTAGGGAGGGACAACTTTGATGGAAAACCAATAAAAGATTCCCTGAGATTCTTGTTGGGGGAGGCAAGTGAAGGTGGTTGTTTTGAAGGGTTAAGAAGTTTCATGGATCCTAATCTGAAGGATTACTCTCTTCCAGAGGCTTTATGTTTGTCTTTTCTAGCAAAGGATTGTGTGGCAGATGATCCCCTGCATAGGCCAAGTATGGATGATATCATGAAAGTCCTTGCAAAAATGGTTTAG 1893 0.4131 MGSLVLVHKIMLHVWFAAWMSLGVCSAYDQNNCISNEVGLGTRYSCKSTQDSCQTFLVYRANKNFNTISNVSKLFNKSSDEVLLKNNLVSSSLSLVLKQGKEVLIPVNCTCSGTYYQTSLSYKVLDNTTFSEIACGVFEGLLSHLTLAEENLSQGNKPEAGAELHVPLICACPDSENFTWSKKVKYLVTYPLIRGDDPDKVSEKFQISPEEFYAVNDLNSLSTVYPNTVLIVPLEDGPIRILDIPDSPSPPPGFLPTNPVGKTQEYAQPSNFYIAGSVIGFLLLITLLASGFYIKRLRKSDVVLSFSPTNSLTLWSPTRSSPISTQTTKSNTTWCLSPDLLVGIKYYLLNYTIEELQKGTKNFSLENNISDEGDFVYKGTVNDLEVMVKRMRLEDTRQVIDLHSKMNHINIVNLIGVCYGESNDPWSYLVFELPKNGCLRDCLSDRCNPLNWYKRTQIAFDIATCLYYLHCCSFPSYAHMNVSSRNIFITANCRAKLADVGRALAATATLTKSNDSMEIPKGLVAPEFLSHGSVSEKVDIFAFGVVLLELILGRDNFDGKPIKDSLRFLLGEASEGGCFEGLRSFMDPNLKDYSLPEALCLSFLAKDCVADDPLHRPSMDDIMKVLAKMV 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00902 630 SUPERFAMILY Protein kinase-like (PK-like) 346 626 IPR011009 -
Phco9g00902 630 Gene3D Transferase(Phosphotransferase) domain 1 435 630 - -
Phco9g00902 630 ProSiteProfiles Protein kinase domain profile. 282 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00902 630 Gene3D Phosphorylase Kinase; domain 1 344 432 - -
Phco9g00902 630 Pfam Protein tyrosine and serine/threonine kinase 382 567 IPR001245 GO:0004672|GO:0006468
Phco9g00902 630 ProSiteProfiles LysM domain profile. 188 232 IPR018392 -
Phco9g00902 630 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 28 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00902 Phco-Chr9 7079676 7081568 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco9g00902 PK_Tyr_Ser-Thr 1.5e-26 CL0016