Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00895 ATGAAGCCACAGCTCAAAATTGCTCTTGCTTTAGTTATTAGCTTGTTTTGGATTCAGAGCTCATTTTGTGATGAAGCTTCTGCTGCATCTAACCTAAACAAGTGGAGATGTAGATGTTCTTTTGGAGGGAATCATAGCTTCTCTCTGACTAATTGTTCTAAGTCATGTGATTGCCACTCAGATGCTGACGAGAGTGCATCCATATGGACATGCATTTGTGCTTCCAATGGGTTTCCCCAAGTGGCAGCAGATGGTCATAGCCCTAATTGCTTTAACGCTTGCAACTGCACCTGGGGAACTGTCAGCAATCTGGGAGGTTCTAAGAAACATGTTTCCATCAAGATTGTTGTAGTTATCCTATTAATATGTGTTATATGTACAACCATGGCGTTTCTTGTCTCTCTCTTATGCCATGTATACAGAAGGGACAGATGTACTATTCAATCACCCATATTCTCAACATATAAGGAAACAAGTAGTGGTAGTACCACCAACTTAATTAGTCATAGGTCAGGGGCTTCTTCGGTGCCTGAAACAAAATTTGCAATAAATTCTCCAATTTGTCATATTACAGGATGCTTTCAGAAAGCCTCTTTCTTATTTGGGAGCCCAAAAGAAACGTATCATGGAAATATTTTTCCATTTTCCTTAGCTGAACTGGAAAATGCCACTGAAAACTTTTCGTCTTCCAACCTAATTGGACTAGGTGGAAGCAGTTATGTATACCATGGTCGGCTGAAAGATGGAAGCGATGTGGCGGTTAAACGACTAAAAGATCAAGGAGGACCAGAAGCAGACTCTGCATTTTTCAAGGAGATTGAACTATTATCTAGACTTCATCATTGTCATTTGGTGCCTTTGCTGGGATACTGTTCAGAGTTAAAAGGAAAACATATTCAGAGGTTACTTGTATTTGACTACATGGCTAATGGAAATTTGAGGGACTGTTTAGATGGAGTTTCTGGAAAACATGTAGATTGGGCTACTCGGGTAATGATTGCGTTAGGTGCTGCAAGGGGCTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGCATGGCCAAAAACCTGAGATCTGATGACCTCCCTAGCTGTTCAAATTCTCCAGCAAGAATGCAGGGTACATTTGGCTATTTTGCACCTGAGTATGCCATTGTTGGTAGAGCTTCTCTTGAGTCAGATGTCTTTAGTTTTGGTGTGGTTCTTCTTGAGCTTATCAGTGGTCGGCAGCCCATCCATAAATCTACTGGCAAAGAGGAAAGCCTTGTTATATGGGCTACTCCTCGCTTACAGGATAGTAGGCGAGTAATAACGGAGCTGGTTGATCCACAATTAAAAGGAAATTTTACAGTAGAAGAGGTGCAGGTGATGGCATACTTAGCAAAGGAGTGTTTGCTGCTGGATCCTGACACTCGACCAACCATGAGTGAGGTTGTTCAGATTCTTTTAAGTATTTCCCCGGGAAAACCTAGGAGGAGAAGAAACATTCCAGGCAGCCTCTTTCAGGAACTGCAGGATGCAGAAAAGCAAAGGCATGCCACACCCGGTAAATTTCCAACATATAGTTCACTGCCAATATATATTGATCATAGTCTATCTGTTGAGAACAAAAGTAAAGAAGCAGATCCAGTTTCAGCTGAGTATATGGAGAGTTTGATCCTCTTGTCTTCAAAGTCTGATGGCTCTTGCGGATCAGAAGAGGAAATAGTAGACTTAACTGAGCCTAGGTTTGAATCGTTTTGCATCACGACTGGCAAAGCCCCTTGA 1839 0.416 MKPQLKIALALVISLFWIQSSFCDEASAASNLNKWRCRCSFGGNHSFSLTNCSKSCDCHSDADESASIWTCICASNGFPQVAADGHSPNCFNACNCTWGTVSNLGGSKKHVSIKIVVVILLICVICTTMAFLVSLLCHVYRRDRCTIQSPIFSTYKETSSGSTTNLISHRSGASSVPETKFAINSPICHITGCFQKASFLFGSPKETYHGNIFPFSLAELENATENFSSSNLIGLGGSSYVYHGRLKDGSDVAVKRLKDQGGPEADSAFFKEIELLSRLHHCHLVPLLGYCSELKGKHIQRLLVFDYMANGNLRDCLDGVSGKHVDWATRVMIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSTGKEESLVIWATPRLQDSRRVITELVDPQLKGNFTVEEVQVMAYLAKECLLLDPDTRPTMSEVVQILLSISPGKPRRRRNIPGSLFQELQDAEKQRHATPGKFPTYSSLPIYIDHSLSVENKSKEADPVSAEYMESLILLSSKSDGSCGSEEEIVDLTEPRFESFCITTGKAP 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00895 612 FunFam receptor-like serine/threonine-protein kinase NCRK 308 518 - -
Phco9g00895 612 ProSiteProfiles Protein kinase domain profile. 227 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00895 612 Gene3D Phosphorylase Kinase; domain 1 202 307 - -
Phco9g00895 612 FunFam receptor-like serine/threonine-protein kinase NCRK 201 307 - -
Phco9g00895 612 PANTHER OS01G0750732 PROTEIN 18 525 - -
Phco9g00895 612 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Phco9g00895 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Phco9g00895 612 SUPERFAMILY Protein kinase-like (PK-like) 207 506 IPR011009 -
Phco9g00895 612 CDD STKc_IRAK 233 509 - -
Phco9g00895 612 SMART serkin_6 227 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00895 612 Pfam Protein kinase domain 229 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00895 612 Gene3D Transferase(Phosphotransferase) domain 1 308 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00895 Phco-Chr9 7019216 7023650 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Phco9g00895 Pkinase 1e-42 CL0016