Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00848 ATGGGGAAGAAGAAGCAGAAAATCGTTCTTCCGCCGGAGCTTCCTCCGGAGATCCCAGAGGACGAAGTTGAGGTTTCCGACGATGACCTCCGATTCATTAAAGAGAATCGCAGCTATGCCTCCTTGCTCTCCACCTTGGACACCCATTCAATCACCAAGCATGTTACACGGGTTGCTGATGCCAAAGATGATGCATTGGAGAAATTTTATGAGAAACGCATGCAAAAAAGAGCTCTCAAGAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGCAGATGCTCTTCCAATCAAGACATTGGATGGAAAACTACATTACCGGACAGCTACAAAGACAGTATCAGAAAATGATCTAAGTGAAGAGGGAACTGCAGAGGATGTCAATGTAGACGAAGGTATGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAATGAAGAAAGAGGCCAAAAAACAAGGGAAAGAAGTGGCTAAAACAGAAGTGGAAGATACACCACAAGCAGCAGTGCTGGCTGAGATAAAAGAAGATCTTACAGCTGAGGAGGCATTTGAAAGTAAGAAGTGTAAACTTGCTGAATTGGGGAGTGCCTTGCTTACAGATCCAGAGTCCAATATTAAACTTCTGAAAGAGATGGTGCAGATATCTAAAGATAATAATCATACCATTGTTAAACTAGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTATACCCGGTTATCGGATCAGGCTTCCTACTGAAAAGGAACTTGAAATGAAGGTTTCAAAGACTGTAAGAAAGATGCGATATTATGAGTCAACTCTTCTTTCAGCGTACAAGGTGTACTTGCAAAGATTGATGGCCTTAGAGAATAAGCCTCTATTTCAGCATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCTAATCCCCATTTCAACTTCCGGGAAAGTTTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTAATGAGGCGATAAGGAAGCTTTGTTGTTCCACAATTAAATCACTCTTTACAAATGAAGGGAAACATGGGGGTGAAGTTACCCTGGAGGCTGTTCGATTGATTGCTGATCATGTTAAAGCTCATAATTGTCAATTTCACCCAGATTCTGTTGATGTTTTCTTGTCCCTTTCATTTAATGAGGATCTCTTGAAGTATGAAAAGAAAGAAGAGGATCAGAAATTAAAAAACAAGAATAGTAAGAAAAGGAAAAACTTAGAGGCATCAAATCAGTTGGTAGAAAATGAGAGAAAGAAAAGTAGGCAAGAATCGATTTCCAAAACGAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCATCCTTTGCCCCAGATGTTATGGAGAGGAGAGAGATGCAAACTGCAACACTCTCAGCTGTCTTTGAGACATACTTTCGCATTTTGAAGCATACAATGCAGTCAATTGGTGTCAGGCCTGAAGCAAATGCCGGGGCATTATCTACTGCAGTGGAACCTCTCCCTTTGCTTGCTCCATGTCTGAAAGGACTGGCAAAATTTTCACATCTTATTGACCTTGATTTCATGGGTGATTTAATGAACCATCTGAAATCACTTGCTTCTGGAAGTAGCTACTCAGGCAACACTGCTGACAAGTGTTCTAAATGTTTGACCGTATCGGAACGTCTCCAATGTTGCATAGTTGCTTTTAAAGTGATGCGGAACAATCTTGATGCCTTAAATGTTGATTTACAGGATTTCTTTATCCACCTTTACAATCTTGTACTTGAATACAAGCCTGGAAGAGATCAAGGAGAAGTTTTGGCAGAAGCTTTGAAGATAATGTTGTGCGATGATAAGCAACATGACATGCAAAAGACTGCTGCATTTATAAAAAGATTAGCAACAATATCACTGTGTGTTGGATCAGCAGATTCCATGGCTGCCTTGGTCACCGTAAAGAATCTCCTTCAGAAGAATGTTAAGTGCAGAAATTTGTTGGAAAATGACATTGGAGGGGGCTCTGTTTCTGGCACAATTCCTAAATATCTACCATATTCCACAGACCCCAATTTAAGTGGTGCCCTTGCCTCAGTACTTTGGGAACTCAATCTTTTGTCCAGCCATTATCATCCAGCTATATCAACGCTAGCCTCGGGCATTTCAAGTATGAGTACTGCACATAACCAGGTCCTATTATCCAAGACCTCTCCTCAACTAGCTTATAAAGAAATGTCTCTGGACCAGGAATTATGTTTCACACAACAAAGTGGCAATATAAAATTAAATAACAAGCGGAGACGAACAAATGGCCCTGCTACATCACCTTCCATTGGTTCTACAACTGTATTGAGTTCATTTGATGACAATGAGTTGCAGAGGAAACTTATTTCCCATTTTATGGTTCATCATGACATCAAGGAGAATGAAAGGTTGAGAAAGGAGCTGGATAGGACTGCACTATCGCTACAACTATATGAACAATATAAGAAACAAAAGAAACAAAAGAAACGATCATAG 2496 0.4034 MGKKKQKIVLPPELPPEIPEDEVEVSDDDLRFIKENRSYASLLSTLDTHSITKHVTRVADAKDDALEKFYEKRMQKRALKKEKEETGLQVDRADALPIKTLDGKLHYRTATKTVSENDLSEEGTAEDVNVDEGMVKLTKAEKRAKLKKMKKEAKKQGKEVAKTEVEDTPQAAVLAEIKEDLTAEEAFESKKCKLAELGSALLTDPESNIKLLKEMVQISKDNNHTIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKVYLQRLMALENKPLFQHVAVRCICSLLDANPHFNFRESLLDATVRNISSTNEAIRKLCCSTIKSLFTNEGKHGGEVTLEAVRLIADHVKAHNCQFHPDSVDVFLSLSFNEDLLKYEKKEEDQKLKNKNSKKRKNLEASNQLVENERKKSRQESISKTREEVEADYKAASFAPDVMERREMQTATLSAVFETYFRILKHTMQSIGVRPEANAGALSTAVEPLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLKSLASGSSYSGNTADKCSKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFIHLYNLVLEYKPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATISLCVGSADSMAALVTVKNLLQKNVKCRNLLENDIGGGSVSGTIPKYLPYSTDPNLSGALASVLWELNLLSSHYHPAISTLASGISSMSTAHNQVLLSKTSPQLAYKEMSLDQELCFTQQSGNIKLNNKRRRTNGPATSPSIGSTTVLSSFDDNELQRKLISHFMVHHDIKENERLRKELDRTALSLQLYEQYKKQKKQKKRS 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00848 831 MobiDBLite consensus disorder prediction 1 22 - -
Phco9g00848 831 MobiDBLite consensus disorder prediction 397 436 - -
Phco9g00848 831 Coils Coil 403 430 - -
Phco9g00848 831 Pfam CBF/Mak21 family 555 710 IPR005612 -
Phco9g00848 831 PIRSF Noc3 1 830 IPR016903 -
Phco9g00848 831 SUPERFAMILY ARM repeat 205 626 IPR016024 -
Phco9g00848 831 Coils Coil 139 166 - -
Phco9g00848 831 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Phco9g00848 831 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 819 IPR016903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00848 Phco-Chr9 6583568 6598324 Dispersed