Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00841 ATGAAAATGACACATATTCTGTTGGTTCTGCTTTGGTTCTTCTGCATTTATGCCCCTACTTCGTTTTGTGCAAATATCACCTATGACCACAGAGCATTGGTCATTGATGGCAAGCGCAGAGTCTTGGTCTCTGGTTCTATTCATTACCCCCGTAGCACTCCAGAGATGTGGCCAGACCTCATTCAAAAGTCCAAAGATGGAGGACTTGATGTGATTGAGACTTATGTTTTCTGGAACATACACGAACCAGTTCGAGGCCAGTATAATTTTGAAGGTAGGGGCGATTTGGTTAAATTTGTGAAGACAGTAGCAGCAGCAGGCCTATATGTGCATCTACGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGCTTCCCTCTTTGGCTACATTTTATTCCGGGAATTCAGTTCCGAACTGATAACAAACCATTTGAGGAAGAAATGAAGCGGTTCACTGCTAAGATTGTGGATATGATGAAGCAAGAGAACCTCTATGCATCACAGGGAGGACCTATTATTTTGTCTCAGATTGAAAATGAGTACGGGAACATTGATGCGGCCTATGGTGCTGCTGCTAAATCCTACGTCAAATGGGCAGCATCAATGGCAACATCTCTTGATACAGGGGTTCCTTGGGTAATGTGCCAACAAGAAGATGCTCCTGACCCAATTATTAACACATGCAATGGATTTTACTGTGATCAATTCAATCCAAATTCTTACTCGAAACCGAAAATGTGGACTGAGAACTGGAGTGGATGGTATCTTTTATTTGGTGGTGCTGTGCCTTACAGACCAGTGGAAGATCTCGCTTTTGCTGTGGCACGCTTTTACCAGCGAGGTGGAACTTTTCAGAATTACTATATGTACCATGGAGGGACTAATTTTGGCCGAAGTACTGGTGGACCTTTCATTTCTACTAGTTATGATTATGATGCTCCAATTGATGAGTATGGAATTATTAGACAGCCTAAGTGGGGCCACCTTAAAGACTTGCATACGGCCATAAAACTTTGTGAAGAAGCACTGACAGCTACAGATCCAACAATTACATCTCTTGGACCAAATATAGAGGCTGCAGTTTACAAGACAGGAGCTGTATGTGCTGCCTTCCTTGCCAACAACGCCACATATGATACAAATGTGACCTTCAATGGAAACTCATATCACCTGCCCGCATGGTCTGTCAGCATCTTACCAGACTGCAGGAATGTAGTGCTTAATACAGCAAAGATTAGTTCTGTATCTATGATTTCAAGCTTCACAACTGAGTCTTTAAAAGAAGACATTAGTTCTTCGGATAATTGTAGCTCGGGATGGAGTTGGATTAGTGAACCTATTGGCATTTCAAAGGCTGATTCATTCTCAAAATTTGGGTTAGTGGAGCAAATAAATACAACTGCTGATAGAAGCGATTACTTGTGGTACTCATCAAGCATCGATCTTGATGTTGGTACTCAAACTGTCCTTCACATTGAATCCCTTGGTCATGCTCTTCATGCTTTCATAAATGGGAAGCTTGCAGGGAGTGGAACGGGTACTGCGGTCAAAGTAGACATCCCCATCACACTAGTGGCTGGAAGGAACACAATTGATCTCTTGAGTTTAACAGTGGGGCTCCAGAACTATGGAGCTTTTTTTGACACATGGGGTGCAGGGATCACTGGCCCTGTGATACTGAAAGGTTTGAAAAATGGGAGCTCTCTTGATCTGTCCTCCCAGAAGTGGACATATCAGATAGGTCTTAAAGGTAAAGGTTTAGGTCCATCTAGTGGCAGTTCTGGCCAGTGGAATTCACAATCTACTTTACCTACAAACCAACCGTTGATTTGGTACAAGACAAACTTCGTTGCCCCCTCTGGTAGTGACCCAGTTGCAATTAACATGACGGGGATGGGAAAAGGTGAGGCTTGGGTGAATGGACAGAGCATTGGGCGGTACTGGCCTACGTATGCCTCTCCAAGTGGTGGTTGTACTGATTCGTGCAATTATAGAGGGGCCTATCAAGCATCCAAATGTCTCAAGAACTGCGGGAACCCATCACAGACATTATACCATGTACCACGATCATGGTTACGACCTAAAAACAACACACTTGTTTTGTTTGAGGAAAGGGGAGGCAACCCTAAGCAAATCACTTTTGCTACAAAACAGATAGGAAGTTTGTGCTCACATGTATCTGAATCTCACCCTCCACCTGTAGACTTGTGGAATTCAGATGCAGAATCAGGAATAAAAGTAGGGCGGCCTGTAATGTTACTGGAGTGCCCTTATCCTAATCAAGTGATCTCTTCCATTAAAGTTGCTAGTTTTGGAACACCTCAGGGGACTTGTGGGAACTTCAAACACGGAAACTGCAGTAGCAAGAAGGCTCTATCCGTTGTGCAAAAGGAGTGCATTGGATCAAGCAGTTGTAGAATTGGAGTATCAATTAATACGTTCGGAGATCCATGTACAGGAGTAGCAAAGAGTTTAGCTGTTGAAGCTTCTTGTGCATAG 2505 0.4363 MKMTHILLVLLWFFCIYAPTSFCANITYDHRALVIDGKRRVLVSGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNIHEPVRGQYNFEGRGDLVKFVKTVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNKPFEEEMKRFTAKIVDMMKQENLYASQGGPIILSQIENEYGNIDAAYGAAAKSYVKWAASMATSLDTGVPWVMCQQEDAPDPIINTCNGFYCDQFNPNSYSKPKMWTENWSGWYLLFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRSTGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDLHTAIKLCEEALTATDPTITSLGPNIEAAVYKTGAVCAAFLANNATYDTNVTFNGNSYHLPAWSVSILPDCRNVVLNTAKISSVSMISSFTTESLKEDISSSDNCSSGWSWISEPIGISKADSFSKFGLVEQINTTADRSDYLWYSSSIDLDVGTQTVLHIESLGHALHAFINGKLAGSGTGTAVKVDIPITLVAGRNTIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSSLDLSSQKWTYQIGLKGKGLGPSSGSSGQWNSQSTLPTNQPLIWYKTNFVAPSGSDPVAINMTGMGKGEAWVNGQSIGRYWPTYASPSGGCTDSCNYRGAYQASKCLKNCGNPSQTLYHVPRSWLRPKNNTLVLFEERGGNPKQITFATKQIGSLCSHVSESHPPPVDLWNSDAESGIKVGRPVMLLECPYPNQVISSIKVASFGTPQGTCGNFKHGNCSSKKALSVVQKECIGSSSCRIGVSINTFGDPCTGVAKSLAVEASCA 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00841 834 SUPERFAMILY Galactose-binding domain-like 398 565 IPR008979 -
Phco9g00841 834 Gene3D Glycosidases 21 341 - -
Phco9g00841 834 FunFam Beta-galactosidase 290 415 - -
Phco9g00841 834 Pfam Galactose binding lectin domain 756 833 IPR000922 GO:0030246
Phco9g00841 834 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Phco9g00841 834 FunFam Beta-galactosidase 416 564 - -
Phco9g00841 834 SUPERFAMILY Galactose-binding domain-like 577 741 IPR008979 -
Phco9g00841 834 Gene3D - 748 834 IPR043159 -
Phco9g00841 834 FunFam Beta-galactosidase 21 341 - -
Phco9g00841 834 FunFam Beta-galactosidase 585 725 - -
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 636 652 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 609 623 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 CDD Gal_Rha_Lectin_BGal 750 833 - -
Phco9g00841 834 SUPERFAMILY (Trans)glycosidases 26 342 IPR017853 -
Phco9g00841 834 Pfam Beta-sandwich domain in beta galactosidase 348 414 IPR041392 -
Phco9g00841 834 ProSiteProfiles SUEL-type lectin domain profile. 748 834 IPR000922 GO:0030246
Phco9g00841 834 PANTHER BETA-GALACTOSIDASE RELATED 16 774 IPR001944 GO:0004553|GO:0005975
Phco9g00841 834 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Phco9g00841 834 Gene3D - 451 575 - -
Phco9g00841 834 Gene3D - 576 658 - -
Phco9g00841 834 Gene3D - 674 727 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00841 Phco-Chr9 6545705 6551319 Wgd