Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00837 ATGCTCGACCGCTCCGATTTCGCCGCAAACCAAGGAATTGTGTCGCGGAATGGGGACGTGTTTGATCACAGGGAGCTGCCTGCAAGCTTGTCAAAGCTTTTAATTTTTGTGACTTGCACTTTCTATTCCATTCCTAAGCACATGGATACTGATGCCATTGGAGATCTTGTTGACAAGCTCAAGGCTGTGCAGAATGACAATGTAGAAGATCAAGATGAATATGATGATGTTGATGACGATGATGAAGAAGAAGAACATGAACCCATCACACTTGGTTTTGTTGACAAGCCAAAGAATAAATGGTCTCTTCAACGTCAATATTTCCCAAGCAAAGCTGGAGGAGTCCCTGCTTGGCTTGACCCTTTGAATATACCATCAGGGGGATCGTTTGTGTGTGACATTTGTGGAGACCCTTTACAATTCTTGCTTCAGGTTTATGCACCAACTGAGAAGGAAACTGCATTTCACCGAATGTTGTTTGTTTTTATGTGTCCCTCTATGAAATGCCTCCTCAGGGATCAACATGAGCAATGGAAACACCATCCAGAGAAGCCATCTAGAAGTGTGAAGGTCTTCCGTTGTCAATTACCATGTGTTAATCCATTTTACTCCCAAGAATGCCCTCAGTATAATGAGAGTCACAAACCTGCTGGCTCTGGAGCTGTTCTTTGTGATTGGTGTGGCACTTGGAAAGGAGACAAACTTTGTAGTAGTTGCAGACAAGCACGGTATTGCTCTGAGAAACATCAGGTTATGAGTTGGCGCGCAGGGCATAAAATTGCTTGCCCTCTGATGCAAATTTCTTCGCCTGTTTCTGGATCCAACAAAAGTGGAACCACCTCGTTCGAGTCACGAAAAGTTGGAAGCAAGAATCTGTGGCCTGAATTTGAGATCATCATTGAAGATGAAAGTGAAGATAATAGAGACACGTCTGAGGAAAATACCTTATCTAATTCCTTGATCTCAAGGACCAGGGCTGATGACACAATGAATTCAATTTTTGATAACTTTCAGCGTGACGCTGACAAAAAGAGTTGGGCCTCTTTCCAGGAATGCATCGACAAGGCCCCTGAACAAGTGCTAAGGTATTATAGGAATACTAATGTGAAGCCAATATGGCCTGTTTCAAGTGGTCGACCATCAAATGCTGATATCCCTAGATGTAGTTACTGCAGCGGACCTATGTGTTGTGAATTTCAGATTTTGCCACAGCTGCTTTATTACTTCGGCGTTGACAATGAAGTGGACTCTCTAGATTGGGCTTCAATTGTGGTGTATGCATGTGAAGCCTCTTGCAATGCAAGTTTGCCTTACAAACATGAATTTGCTTGGGTACAAATTTATTCACCTTCCACAGCCTTATAG 1365 0.4315 MLDRSDFAANQGIVSRNGDVFDHRELPASLSKLLIFVTCTFYSIPKHMDTDAIGDLVDKLKAVQNDNVEDQDEYDDVDDDDEEEEHEPITLGFVDKPKNKWSLQRQYFPSKAGGVPAWLDPLNIPSGGSFVCDICGDPLQFLLQVYAPTEKETAFHRMLFVFMCPSMKCLLRDQHEQWKHHPEKPSRSVKVFRCQLPCVNPFYSQECPQYNESHKPAGSGAVLCDWCGTWKGDKLCSSCRQARYCSEKHQVMSWRAGHKIACPLMQISSPVSGSNKSGTTSFESRKVGSKNLWPEFEIIIEDESEDNRDTSEENTLSNSLISRTRADDTMNSIFDNFQRDADKKSWASFQECIDKAPEQVLRYYRNTNVKPIWPVSSGRPSNADIPRCSYCSGPMCCEFQILPQLLYYFGVDNEVDSLDWASIVVYACEASCNASLPYKHEFAWVQIYSPSTAL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00837 454 PANTHER PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED 65 450 - -
Phco9g00837 454 Pfam MYND finger 224 262 IPR002893 -
Phco9g00837 454 Gene3D - 211 266 - -
Phco9g00837 454 ProSitePatterns Zinc finger MYND-type signature. 224 262 IPR002893 -
Phco9g00837 454 ProSiteProfiles Zinc finger MYND-type profile. 224 262 IPR002893 -
Phco9g00837 454 SUPERFAMILY HIT/MYND zinc finger-like 222 265 - -
Phco9g00837 454 MobiDBLite consensus disorder prediction 69 87 - -
Phco9g00837 454 Pfam Programmed cell death protein 2, C-terminal putative domain 344 446 IPR007320 GO:0005737
Phco9g00837 454 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00837 Phco-Chr9 6518288 6522237 Dispersed