Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00815 ATGGATCCTTCTACTGGACAACACCAGCAAATGTCTAACCAGTCATTGGAGAACATGTTGGCATGTTCAAAAGCACAGCAGGAGAGGAAGCCAAGGCCTCAGCCAGAACAAGCTCTAAAGTGCCCCAGATGTGACTCCACCAACACCAAATTTTGTTACTACAACAATTATAGCCTTTCACAGCCAAGGTATTTCTGCAAGTCTTGCAGGAGATATTGGACCAAAGGAGGAACACTGAGGAATGTTCCTGTGGGAGGAGGGTGCAGGAAGAACAAGAGGTCATCATCATCTTCAACATCAAAGAGAATCCAAGATCAAGGATTCACATCCAATCCAAACAACCCGCTCACTGGCCTTCCTTCATTGTCTTATGACTCCAGCGACCTCACTCTTGCATTAGCAAGGCTGCAAAAGCAGTCATGTGGGCAATTGGGTTATGATGAGCATGACTTTTCAATTTTGGGGAACCACACAAGCACCCCATGTGATATCCTTGGCAACCCCGGCATGCACCACTCTTCCACAAACCCAGGCTTCTTGGATTCGCTTAGAAGTGGGTTCCTTGGAACCCAAAGTAATATTCAGAATCTGTACTATGGATATGGGAATGGGGACATGGGGGAGGTGGACAATGGCAATGCTTGTGGTGGGGTTAGTGGAGAGATGATGCTGCCTTATGATCAAGAAATGAGTGTTGCCACCACCCAAGCAGTGACAGTCACTACCATGAAACAAGAACTTTGCAATGCAAGGGAACAAAGTGAGAGTAGGGTGTTGTGGGGTTTCCCATGGCAACTCAATGGAGATACCAACATGGGTGAGCTTGACTCAGGAAGAGCTAATTGGAATGGTCTCACTTCATCTTGGCATGGACTTCTCAATAGTCCACTAATGTAG 897 0.4671 MDPSTGQHQQMSNQSLENMLACSKAQQERKPRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSTSKRIQDQGFTSNPNNPLTGLPSLSYDSSDLTLALARLQKQSCGQLGYDEHDFSILGNHTSTPCDILGNPGMHHSSTNPGFLDSLRSGFLGTQSNIQNLYYGYGNGDMGEVDNGNACGGVSGEMMLPYDQEMSVATTQAVTVTTMKQELCNAREQSESRVLWGFPWQLNGDTNMGELDSGRANWNGLTSSWHGLLNSPLM 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00815 298 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 189 IPR045174 GO:0003700|GO:0006355
Phco9g00815 298 Pfam Dof domain, zinc finger 37 93 IPR003851 GO:0003677|GO:0006355
Phco9g00815 298 MobiDBLite consensus disorder prediction 1 22 - -
Phco9g00815 298 ProSiteProfiles Zinc finger Dof-type profile. 39 93 IPR003851 GO:0003677|GO:0006355
Phco9g00815 298 MobiDBLite consensus disorder prediction 84 121 - -
Phco9g00815 298 MobiDBLite consensus disorder prediction 90 121 - -
Phco9g00815 298 ProSitePatterns Zinc finger Dof-type signature. 41 77 IPR003851 GO:0003677|GO:0006355
Phco9g00815 298 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00815 Phco-Chr9 6245459 6246774 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco9g00815 zf-Dof 6.1e-34 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01556 10 38323777 38325031 Phco9g00815 9 6245459 6246774 PCT