Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00809 ATGGCCGGAGTTAATCCGAATGGCGTCGCAGATTTTCCGGCGCTTCCGACGCACGGCGGACAGTTCATCCAGTACAACATATTCGGCAATCTCTTCGAGGTTACGACGAAGTACCGTCCTCCGATCATGCCTATTGGACGCGGCGCGTACGGAATCGTTTGCTCGCTGTTGAATACGGAGACGAATGAGCTGGTGGCTGTTAAGAAGATAGCGAACGCTTTCGACAATCACATGGACGCTAAGCGAACGCTCCGTGAGATTAAGCTTCTTAAACATTTGGATCATGAAAATGTAATTGCTTTGAGAGATGTTATTCCTCCACCATTGCGTAGAGAGTTTAATGATGTCTACATAGCCACTGAACTCATGGATACTGATCTTCATCATATCATTCGTTCTAATCAAAGTCTGTCGGAGGAGCACTGCCAATACTTCTTGTATCAGATTCTTCGTGGGCTAAAGTACATACATTCTGCAAACATAATCCATAGAGATTTAAAACCGAGCAACCTGTTGCTGAATTCTAATTGCGACTTGAAGATTATTGATTTTGGTCTTGCGCGACCAACTTTGGAAAGCGACTTCATGACAGAATACGTAGTCACAAGATGGTACAGGGCTCCCGAATTATTGTTGAACTCTTCAGATTACACCTCTGCGATAGATGTGTGGTCTGTTGGTTGCATCTTCATGGAGCTTATGAATAAAAAGCCTCTGTTTCCAGGCAAAGACCATGTGCATCAGATGCGCCTATTGACAGAGCTTCTTGGCACCCCAACTGATGCTGACCTTGGGTTAGTGAAAAATGAAGACGCAAGAAGATATATCAGACAGCTTCCTCAATATCCTCGCCAACCTTTAGCTCAGGTCTTCCCCCATGTTCATCCCGCAGCCATTGATCTTGTTGATAAAATGTTGACAATTGATCCCACCAAAAGAATTACAGTTGAAGAAGCACTAGCCCATCCATACCTTGAAAAACTGCATGATGTAGCTGATGAACCAATCTGCATGGAACCATTCTCATTTGAGTTTGAGCAACAGCAATTGGATGAAGAGCAAATAAAAGAGATGATATACAGGGAAGCATTAGCACTCAATCCTCACTATGCTTAA 1116 0.4382 MAGVNPNGVADFPALPTHGGQFIQYNIFGNLFEVTTKYRPPIMPIGRGAYGIVCSLLNTETNELVAVKKIANAFDNHMDAKRTLREIKLLKHLDHENVIALRDVIPPPLRREFNDVYIATELMDTDLHHIIRSNQSLSEEHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNSNCDLKIIDFGLARPTLESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTDADLGLVKNEDARRYIRQLPQYPRQPLAQVFPHVHPAAIDLVDKMLTIDPTKRITVEEALAHPYLEKLHDVADEPICMEPFSFEFEQQQLDEEQIKEMIYREALALNPHYA 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00809 371 Gene3D Phosphorylase Kinase; domain 1 22 362 - -
Phco9g00809 371 Pfam Protein kinase domain 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00809 371 Gene3D Transferase(Phosphotransferase) domain 1 123 352 - -
Phco9g00809 371 FunFam Mitogen-activated protein kinase 24 133 - -
Phco9g00809 371 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Phco9g00809 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Phco9g00809 371 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00809 371 SUPERFAMILY Protein kinase-like (PK-like) 44 333 IPR011009 -
Phco9g00809 371 FunFam Mitogen-activated protein kinase 123 352 - -
Phco9g00809 371 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Phco9g00809 371 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00809 371 CDD STKc_TEY_MAPK 32 368 - -
Phco9g00809 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00809 Phco-Chr9 6188127 6190627 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phco9g00809 Pkinase 1.6e-74 CL0016