Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00795 ATGGAGGAGGATGAAATACCGAAAGAGCCCCTCATCGTGGAGGAATCGACCTCAGGTGAATGCAATGCAGGTGATAACATTCGTTTCCCGTGCGTAGAAAATGACAGAAACACCCCTTGGATCCTTTGTCCCCATTGTGGCTTGTTGAGAAAGAACATGGGTTGCTTTTGTTGCGCAGGGAAATCATGCACCAATTCGGATACCGAAGACTATGGCCACAACTTCGACCACAAACCCTCCAATTTCACAGCCGCAGAAAGCGTCAAAGTTGATTTCAAAGTGAATGGGAAAAAAGAAGATGGTTCTAAAGGTGATCAGCTTGCTCTGGACGTGAAGGATTTAAATTTGAAAGAGGAGGGTTCTCATGATGGAAAAGATAATGGCAATCGGGCGCAGTCATTCAGTTTTAATGAACTTGAAGCTGCGACGGGAAATTTTACGGCAGATTGCTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACTTGGAGAGAATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGGATACGAGAATTTGCAGTTGAGGTGTTGACATTGAGTTTGGCAGACCACCCTAATCTTGTCAAGTTGATTGGATTTTGTGCTGAGGGAGAGCAGAGGCTATTAGTTTATGAATTCATGCCATTGGGGTCTTTGGAGAATCACTTGCTTGATCTTCGGCCTGGTAGCAAACCACTGGATTGGAACACAAGAATGAAAATAGCAGCTGGGGCAGCAAGGGGTTTGGAGTATCTGCATGATAAAATGAAGCCTCCTGTCATATATCGTGACTTGAAATGCTCTAACATTTTGTTAGGAGAGGGATTTCATCCTAAGTTGTCAGATTTTGGCCTGGCAAAAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTCATGGGCACATATGGGTATTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACATTTAAGTCAGATATTTACAGCTTTGGGGTTGTTCTTTTGGAGCTTATTACAGGCCGGAAGGCTATTGACCATATGAAACCTGCCAAAGAACAAAATCTAGTTGCATGGGCAAGACCCTTGTTCAGAGATAGGAAAAAATTTCCCCAGATGGTGGACCCTTTACTTCAAGGTCGATATCCCGTGAGAGGCTTATACCAAGCTCTTGCCATTGCTGCAATGTGTGTACAAGAGCAACCTAATATGCGGCCTGTTATAGTTGATGTTGTCACAGCTCTAAATTACCTAGCTTCTCAGAAGTATGATCCTCAACTTCACCCAGCACAAAGCTCTAGAAGAAGTCCACCTTCTCAGGTAATGCAAAGGGATGATGATGAAGAACGTAGACTTATTTTAAGCACGGAGCATGTGACAGACAGATCTTAA 1407 0.4399 MEEDEIPKEPLIVEESTSGECNAGDNIRFPCVENDRNTPWILCPHCGLLRKNMGCFCCAGKSCTNSDTEDYGHNFDHKPSNFTAAESVKVDFKVNGKKEDGSKGDQLALDVKDLNLKEEGSHDGKDNGNRAQSFSFNELEAATGNFTADCFLGEGGFGKVYKGHLERINQVVAIKQLDPNGLQGIREFAVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEFMPLGSLENHLLDLRPGSKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGFHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHMKPAKEQNLVAWARPLFRDRKKFPQMVDPLLQGRYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQKYDPQLHPAQSSRRSPPSQVMQRDDDEERRLILSTEHVTDRS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00795 468 PANTHER OS07G0668900 PROTEIN 99 431 - -
Phco9g00795 468 CDD STKc_IRAK 152 421 - -
Phco9g00795 468 Pfam Protein tyrosine and serine/threonine kinase 151 363 IPR001245 GO:0004672|GO:0006468
Phco9g00795 468 ProSiteProfiles Protein kinase domain profile. 146 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00795 468 FunFam probable serine/threonine-protein kinase RLCKVII 118 222 - -
Phco9g00795 468 MobiDBLite consensus disorder prediction 445 468 - -
Phco9g00795 468 SUPERFAMILY Protein kinase-like (PK-like) 132 442 IPR011009 -
Phco9g00795 468 SMART serkin_6 146 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00795 468 MobiDBLite consensus disorder prediction 431 468 - -
Phco9g00795 468 ProSitePatterns Protein kinases ATP-binding region signature. 152 175 IPR017441 GO:0005524
Phco9g00795 468 Gene3D Phosphorylase Kinase; domain 1 131 222 - -
Phco9g00795 468 Gene3D Transferase(Phosphotransferase) domain 1 223 440 - -
Phco9g00795 468 FunFam Serine/threonine-protein kinase PBS1 223 438 - -
Phco9g00795 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00795 Phco-Chr9 6006983 6011325 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco9g00795 PK_Tyr_Ser-Thr 6.4e-42 CL0016