Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00786 ATGTACACACACCGCAACGCCTCCTTCTCACGCGCCGCCGAGTCCCTCGCCCATTTTCTCTCTCCGCAGGACGCATCCACGGCGTCGCCAATGCAGTACGCCGCCGCTCCTCAGCCGCAGCACCACCAAGTGGTCCTTGGGGAGTTCGATTCGGAGGCCAGTTCGAATAACACGTACAACAGCTGCGGCAGCGGGTGCACCAGCTACATGGGGTCGCCTAGTTCCCTGGCGAGTTACGAGAGTCGGCGAGTGCAGAGGAGCGTCAGCAGCCACTCGCTGCAGAAGAACAGTGGTGGGCCCCATCACCCCTTTTCTCCTCTCTTCGCTCAGTTGCTTGACTCCCAAAACGGTCCCGTACGGAGAGCTTGCAGTACCGGTGACCTTCAGAGATTTCATGGAATGCAATATTATCATCATTCAGATAGTCCATTGTCGAGTGAAAGTAGTTTGATCATAGAAGAAATGAGCAGAACCAGTCCTTATAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGGAGCAAGAGAAACCAGAGGAACTTCGGCAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGATAGCAGGCCACGAATCAGAGGGCGATTTGCAAAGAATGACGAAATTGCAATTAACCCTCCAGTTCAGTGGAGCCACATGGGTAGTGGAGAGGAAGAGGATGATGAAGAAGAGAATTGGGCAAATTTCTTTGATTCCTTAGTTCCTGCAAATCTTGCTCAGGGGCCTCATGAGAGTAGTTCTTCCTTTGAAATGGAGTGCTCTGCATTTGTCTTTAAGCTCAATCAAGAAGCCCTTTTTCCACTTTACAGAAACATGTCACCCTTGGGTTATAGCAGGGTGAAAGCAGAGCAAAAGGAATTGACAAAAAATGTCAAAAAGCATGAAAATAGAGGAGCAGAAACCAGGTGCCCCCCTAGTAAGCAAGTTTGA 957 0.4995 MYTHRNASFSRAAESLAHFLSPQDASTASPMQYAAAPQPQHHQVVLGEFDSEASSNNTYNSCGSGCTSYMGSPSSLASYESRRVQRSVSSHSLQKNSGGPHHPFSPLFAQLLDSQNGPVRRACSTGDLQRFHGMQYYHHSDSPLSSESSLIIEEMSRTSPYSPEEKKVRIERYRSKRNQRNFGKKIKYACRKTLADSRPRIRGRFAKNDEIAINPPVQWSHMGSGEEEDDEEENWANFFDSLVPANLAQGPHESSSSFEMECSAFVFKLNQEALFPLYRNMSPLGYSRVKAEQKELTKNVKKHENRGAETRCPPSKQV 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00786 318 Coils Coil 286 306 - -
Phco9g00786 318 MobiDBLite consensus disorder prediction 77 103 - -
Phco9g00786 318 MobiDBLite consensus disorder prediction 295 318 - -
Phco9g00786 318 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 25 235 IPR045281 GO:0009909
Phco9g00786 318 ProSiteProfiles CCT domain profile. 166 208 IPR010402 GO:0005515
Phco9g00786 318 Pfam CCT motif 168 208 IPR010402 GO:0005515
Phco9g00786 318 MobiDBLite consensus disorder prediction 295 310 - -
Phco9g00786 318 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00786 Phco-Chr9 5917399 5920416 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco9g00786 CCT 4.4e-18 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01577 10 38588888 38590978 Phco9g00786 9 5917399 5920416 PCT