Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g00780 | ATGGAATCACCTACTGTGCAGCCGCAAGCTGCATCAGCAAGCACGCCAAGGAAAAAAATGACAAAACAATTGACAGGTAAAAGGGATGATACCTCTTTGCATTCTGCAGCAAGAGCAGGGAATCTGAGCGTTCTGAAGGACACAGTTAGTGGCACTGAAGGGGGTGAACTGCGTGCGTTGTTGACAAAGCAGAACCATGCTGGAGAAACGGTGCTTTATGTTGCTGCTGAATATGGTTATGTTGATATGGTTAGGGAGATGATTCAATATTATGATCTTGCTGGTGCTGGAATTAAGGCAAGGAATGGTTTTGATGCACTCCACATTGCGGCCAAACAAGGCGATTTAGATATTGTGAAGATCCTAATGGAGGCTCATTCTGAATTGTCAATGACAGTGGATCCATCCAACACCACAGCCCTGCACACTGCTGCATTACAAGGGCACACTGAGATAGTGAAATTTCTATTGGAAGCAGGTAGTAGTCTGGCAACCATTGCTAGAAGTAATGGGAAAACGGCTTTGCATTCTGCAGCAAGAAATGGACATGTAGAGGTTGTGAAAGCACTTCTGGAGAAGGAGCCTGCAGTTGCAACACGCACTGATAAGAAGGGACAGACAGCACTTCACATGGCTGTGAAGGGACAGAATCTTGAGGTGGTGGAGGAGTTGATTAAAGCTGATCCGTCTACGATAAACATGGTTGATAACAAGGGTAACACGCCATTGCATATAACAACCAGGAAGGGCAGGGCTCAGATTGTTAAGTTGCTTCTTGGACAGACAGAAACAGATTCCTTGGCAGTTAATAGGTCTGGCGAAACTGCACTAGACACTGCTGAAAAAACTGGGAACTCTGAAGTTAAAGATATTCTGCTGGAATACGGTGTTCGAAGCGCCAAAGCCTTAAAGGCTCAGCCAACAACAGCTACCGCCCGTGAGTTGAAACAAACTGTGAGTGACATAAAACATGAAGTTCACTACCAGTTGGAACACACCCGCCAAACTAGAAGAGGTGTTCAAGGCATAGCCAAACGTATCAACAAAATGCATGCTGAAGGACTCAACAATGCAATAAACTCTACCACTGTGGTTGCAGTCCTTATTGCCACAGTTGCCTTTGCAGCTATTTTCACAGTCCCTGGCCAATTTGCTGATGATCCAAAAGACATTCCTCCAGGTTCAGGGATGACCATTGGTGAAGCAAACATAGCCCCACAAGCTGCATTTCTCATTTTCTTTGTCTTCGATTCCATTGCCCTCTTCATTTCTCTGGCTGTGGTGGTGGTGCAAACCTCGGTTGTGATCATAGAAAGCAAGGCAAAGAAGCAGATGATGGCCATCATTAACAAGCTGATGTGGTTGGCTTGTGTGCTTATTTCTGTGGCCTTCTTGGCATTAACATTTATAGTGGTGGGGAAGGATCAGAAGTGGCTTGCAATTGGAGTCACTATCATAGGGACAACTATAATGGCCACAACTTTGGGCACCATGTGTTACTGGGTTATTAGGCATCGCATTGAGGCCTCAAATTTAAGGAGCATTCGGAAATCCTCAATGGGAAGCAGGTCAAGGTCTTTTTCAGTATCAGTTATGTCAGATTCCGAGCTACTAAACAATGACCGCAAGATACTTTATGCCATATAG | 1647 | 0.4505 | MESPTVQPQAASASTPRKKMTKQLTGKRDDTSLHSAARAGNLSVLKDTVSGTEGGELRALLTKQNHAGETVLYVAAEYGYVDMVREMIQYYDLAGAGIKARNGFDALHIAAKQGDLDIVKILMEAHSELSMTVDPSNTTALHTAALQGHTEIVKFLLEAGSSLATIARSNGKTALHSAARNGHVEVVKALLEKEPAVATRTDKKGQTALHMAVKGQNLEVVEELIKADPSTINMVDNKGNTPLHITTRKGRAQIVKLLLGQTETDSLAVNRSGETALDTAEKTGNSEVKDILLEYGVRSAKALKAQPTTATARELKQTVSDIKHEVHYQLEHTRQTRRGVQGIAKRINKMHAEGLNNAINSTTVVAVLIATVAFAAIFTVPGQFADDPKDIPPGSGMTIGEANIAPQAAFLIFFVFDSIALFISLAVVVVQTSVVIIESKAKKQMMAIINKLMWLACVLISVAFLALTFIVVGKDQKWLAIGVTIIGTTIMATTLGTMCYWVIRHRIEASNLRSIRKSSMGSRSRSFSVSVMSDSELLNNDRKILYAI | 548 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat profile. | 170 | 202 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Phco9g00780 | 548 | Pfam | Ankyrin repeats (3 copies) | 88 | 163 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | Pfam | Ankyrin repeats (3 copies) | 170 | 229 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat region circular profile. | 170 | 193 | - | - | |
| Phco9g00780 | 548 | Pfam | Ankyrin repeat | 239 | 260 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat region circular profile. | 136 | 163 | - | - | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat profile. | 204 | 226 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SUPERFAMILY | Ankyrin repeat | 33 | 297 | IPR036770 | - | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat profile. | 238 | 259 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | Gene3D | - | 167 | 341 | IPR036770 | - | |
| Phco9g00780 | 548 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
| Phco9g00780 | 548 | Gene3D | - | 5 | 166 | IPR036770 | - | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat region circular profile. | 102 | 130 | - | - | |
| Phco9g00780 | 548 | PANTHER | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT | 11 | 528 | - | - | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat region circular profile. | 238 | 259 | - | - | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat profile. | 102 | 134 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SMART | ANK_2a | 67 | 96 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SMART | ANK_2a | 102 | 131 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SMART | ANK_2a | 272 | 302 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SMART | ANK_2a | 136 | 165 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SMART | ANK_2a | 28 | 59 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SMART | ANK_2a | 204 | 234 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SMART | ANK_2a | 170 | 199 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | SMART | ANK_2a | 238 | 269 | IPR002110 | GO:0005515 | |
| Phco9g00780 | 548 | Pfam | Domain of unknown function | 353 | 470 | IPR026961 | - | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat region circular profile. | 204 | 226 | - | - | |
| Phco9g00780 | 548 | ProSiteProfiles | Ankyrin repeat profile. | 136 | 168 | IPR002110 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco9g00780 | Phco-Chr9 | 5823554 | 5826525 | Dispersed/Wgd |