Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g00771 | ATGATCTGTGGGAGAGGCAAAGGGATTAATCCAAATCCATTGCTCCATTATGCTAACAATGGATACCAATTCCATACCCATAAACCTCGATCTCATGAAAGACCAACTCCAAAATTTCGCAGGCGCATTCCCTTCGTCACCGAAGTCAAAACAGTGGAAGACCCAGAAGAAGCCTTGTCTCTCTTTCACCGTTACAAGGAACAGGGTTTCCGCCATTATTACCCTTCCTATGCCGCATTGCTCTATAAACTAGCTCGTTCTAGAATGTTCCAAGCCGTCGAAACCATTCTCGCTCACATGAAAGACACCGATATGCAATGCAAAGAAAGCGTCTTCATTGCTCTCTTTCAATATTACGGTCCCCAAAAGGCCGTTGAACTCTTCAACAGAATGCCGCAGTTCAACTGTGTCCGCACGATACAGTCCCTCAACGGTCTTCTCAATGTTCTTGTAGACAATGATAGGTTCGATGAGGCTAATGATGTTTTTGGTCGATCCTATGAAATTGGTTTTCGTCCAAACACTGTCACTTACAATATAATGATCAAGGGGTGGTTGGGAAAGGGCGAGTGGGGGAAAGCATGTGAGGTGTTTGATGAAATGCTTCAGAAGAGAGTGGAACCGAGTGTAGTCACTTACAATAGTCTCATTGGGTTTTTGTGTAGGAAAGGTGATTTGGATAAAGCAATGGCCTTGCTTGAGGACATGGGTCAGAAAGGTAGACGCGCAAATGAAGTAACTTATGCTCTTTTGATGGAGGGTTTGTGTTCCGTGGAGAAGTATGATGAAGCTAAGAAGCTAATGTTTGATATGGCGTATCGTGGCTGCAAACCCCAGCCGGTGAATTTTGGTGTACTGATGAATGATCTTGGGAAGAGAGGAAAGGTTGAAGAGGTCAAGTCTTTGCTCCATGAGATGAAGAAAAGGCGGCTTAAGCCTGATGTTGTAACTTTCAACATATTGATTAATTATCTTTGCAAGGAAGGCAAGGCAGTGGAAGCTTACAAAGTTTTATTTGAGATGAAGATTGGGGGATGTGAGCCTAATGCAGCTACATACAGGATGGTGGTTGATGGTTTGTGCCGGATAGGGGATTTTGAGACAGGTCTGAGTGTTTTGAATGCAATGTTAACAGGTAGGCATTGGCCACGTTCAGAAACATTCAATTGTCTGGTTGTTGGCCTTTTGAAATCTGGGAATATTGATGGTGCATGCTTTGTCTTGGAAGAGATGGAGAAGAGAAAGGTAGAATTTGATTTGGGGAGCTGGGAAACCATAATAAAGTTTGCCTGCAGTGAGGATGAGGGTGTCAGTGAGCTTATGACTGTACTTACATCTCCGTAA | 1344 | 0.4368 | MICGRGKGINPNPLLHYANNGYQFHTHKPRSHERPTPKFRRRIPFVTEVKTVEDPEEALSLFHRYKEQGFRHYYPSYAALLYKLARSRMFQAVETILAHMKDTDMQCKESVFIALFQYYGPQKAVELFNRMPQFNCVRTIQSLNGLLNVLVDNDRFDEANDVFGRSYEIGFRPNTVTYNIMIKGWLGKGEWGKACEVFDEMLQKRVEPSVVTYNSLIGFLCRKGDLDKAMALLEDMGQKGRRANEVTYALLMEGLCSVEKYDEAKKLMFDMAYRGCKPQPVNFGVLMNDLGKRGKVEEVKSLLHEMKKRRLKPDVVTFNILINYLCKEGKAVEAYKVLFEMKIGGCEPNAATYRMVVDGLCRIGDFETGLSVLNAMLTGRHWPRSETFNCLVVGLLKSGNIDGACFVLEEMEKRKVEFDLGSWETIIKFACSEDEGVSELMTVLTSP | 447 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g00771 | 447 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 174 | 208 | IPR002885 | - | |
| Phco9g00771 | 447 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 209 | 243 | IPR002885 | - | |
| Phco9g00771 | 447 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 314 | 348 | IPR002885 | - | |
| Phco9g00771 | 447 | NCBIfam | pentatricopeptide repeat | 176 | 209 | IPR002885 | - | |
| Phco9g00771 | 447 | NCBIfam | pentatricopeptide repeat | 316 | 350 | IPR002885 | - | |
| Phco9g00771 | 447 | NCBIfam | pentatricopeptide repeat | 211 | 240 | IPR002885 | - | |
| Phco9g00771 | 447 | NCBIfam | pentatricopeptide repeat | 246 | 278 | IPR002885 | - | |
| Phco9g00771 | 447 | NCBIfam | pentatricopeptide repeat | 352 | 377 | IPR002885 | - | |
| Phco9g00771 | 447 | NCBIfam | pentatricopeptide repeat | 284 | 315 | IPR002885 | - | |
| Phco9g00771 | 447 | NCBIfam | pentatricopeptide repeat | 387 | 419 | IPR002885 | - | |
| Phco9g00771 | 447 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 349 | 383 | IPR002885 | - | |
| Phco9g00771 | 447 | Pfam | Pentatricopeptide repeat domain | 232 | 293 | IPR002885 | - | |
| Phco9g00771 | 447 | Gene3D | Tetratricopeptide repeat domain | 244 | 307 | IPR011990 | GO:0005515 | |
| Phco9g00771 | 447 | Gene3D | Tetratricopeptide repeat domain | 308 | 378 | IPR011990 | GO:0005515 | |
| Phco9g00771 | 447 | Gene3D | Tetratricopeptide repeat domain | 379 | 445 | IPR011990 | GO:0005515 | |
| Phco9g00771 | 447 | Gene3D | Tetratricopeptide repeat domain | 51 | 120 | IPR011990 | GO:0005515 | |
| Phco9g00771 | 447 | Gene3D | Tetratricopeptide repeat domain | 121 | 243 | IPR011990 | GO:0005515 | |
| Phco9g00771 | 447 | Pfam | PPR repeat family | 313 | 362 | IPR002885 | - | |
| Phco9g00771 | 447 | Pfam | PPR repeat family | 173 | 217 | IPR002885 | - | |
| Phco9g00771 | 447 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 244 | 278 | IPR002885 | - | |
| Phco9g00771 | 447 | SUPERFAMILY | TPR-like | 88 | 337 | IPR011990 | GO:0005515 | |
| Phco9g00771 | 447 | PANTHER | MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1 | 122 | 434 | - | - | |
| Phco9g00771 | 447 | Pfam | PPR repeat | 387 | 415 | IPR002885 | - | |
| Phco9g00771 | 447 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 279 | 313 | IPR002885 | - | |
| Phco9g00771 | 447 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 384 | 418 | IPR002885 | - |