Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00767 ATGGAGATTGATCTTTCTCCTCAGTTAGCCAAGAAGGTGTACGAGGGCAATGGTGGATCTTACTATGCATGGTCCCCTTCTGAGCTTCCCATGTTGCGTGAAGGAAACATCGCTGCTGCCAAACTAGCTCTTCAGAAGAATGGTTTTGCCCTTCCTCATTACTCTGATTCCTCCAAGGTTGCATACGTTCTACAAGGAAGTGGAGTTGCTGGAGTTGTGCTCCCTGAAGCAGAAGAGAAGGTTGTTGCAATTAAGAAGGGTGATGCTTTGGCGCTCCCTTTTGGTGTGGTGACATGGTGGTATAACAAGGAGGATACTGAATTGGTAGTTCTGTTCTTGGGTGACACTTCAAAAGCCCACAAGACTGGTGAATTCACTGATTTTTTTCTGACTGGTGCTAATGGAATCTTCACTGGATTTTCAACTGAGTTTGTGGGCAGGGCTTGGGACTTGGAAGAAAAGGATGTGAAAACCCTTATTGGGAATCAATCGGGTAAGGGTATTGTGAAGCTTGAAGGAAATATCAACCTTCCTGAGCCTAAAGAGGAACATAGGAAGGGCATGGCATTGAACTGTGAAGAGGCTCCATTGGATGTTGACATCAAGAATGGAGGAAGGGTTGTGGTGTTGAACACCAAGAACCTTCCCTTGGTAGGTGAGGTTGGTCTAGGAGCAGACCTTGTGAGGTTGGATGGAAAAGCCATGTGTTCTCCAGGATTCTCTTGTGATTCTGCTTATCAGGTTACATACATTGTGAGGGGAAGTGGTCGTGCTCAGGTTGTTGGTGTGGATGGTCGTAGGGTTTTGGAGACAACTGTGAAAGCTGGAAATTTGTTCATTGTGCCAAGGTTTTTTGTTGTGTCCAAGATTGCTGACCCTGATGGCCTGGAGTGGTTCTCCATCATCACTACCCCCAATCCTGTATTTACTCACCTGGCTGGAAGTATTGGGGCATGGAAGGCTCTTTCACCAACGGTTCTTCAGGCTTCTTTCAATGTGGATGCAGAGCTTGAGCAACTCTTTCGTTCAAAGAGGAATGCAGATGCCATTTTCTTCCCTCCTCCAAATTGA 1071 0.4631 MEIDLSPQLAKKVYEGNGGSYYAWSPSELPMLREGNIAAAKLALQKNGFALPHYSDSSKVAYVLQGSGVAGVVLPEAEEKVVAIKKGDALALPFGVVTWWYNKEDTELVVLFLGDTSKAHKTGEFTDFFLTGANGIFTGFSTEFVGRAWDLEEKDVKTLIGNQSGKGIVKLEGNINLPEPKEEHRKGMALNCEEAPLDVDIKNGGRVVVLNTKNLPLVGEVGLGADLVRLDGKAMCSPGFSCDSAYQVTYIVRGSGRAQVVGVDGRRVLETTVKAGNLFIVPRFFVVSKIADPDGLEWFSIITTPNPVFTHLAGSIGAWKALSPTVLQASFNVDAELEQLFRSKRNADAIFFPPPN 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00767 356 SMART Cupin_1_3 3 157 IPR006045 -
Phco9g00767 356 SMART Cupin_1_3 195 339 IPR006045 -
Phco9g00767 356 CDD cupin_11S_legumin_N 4 173 - -
Phco9g00767 356 CDD cupin_11S_legumin_C 198 353 - -
Phco9g00767 356 Gene3D Jelly Rolls 3 195 IPR014710 -
Phco9g00767 356 Gene3D Jelly Rolls 196 356 IPR014710 -
Phco9g00767 356 PRINTS 11-S seed storage protein family signature 294 312 IPR006044 GO:0045735
Phco9g00767 356 PRINTS 11-S seed storage protein family signature 276 291 IPR006044 GO:0045735
Phco9g00767 356 PRINTS 11-S seed storage protein family signature 211 231 IPR006044 GO:0045735
Phco9g00767 356 PRINTS 11-S seed storage protein family signature 258 274 IPR006044 GO:0045735
Phco9g00767 356 PRINTS 11-S seed storage protein family signature 316 333 IPR006044 GO:0045735
Phco9g00767 356 Pfam Cupin 199 337 IPR006045 -
Phco9g00767 356 Pfam Cupin 10 156 IPR006045 -
Phco9g00767 356 SUPERFAMILY RmlC-like cupins 12 346 IPR011051 -
Phco9g00767 356 PANTHER OS03G0336100 PROTEIN-RELATED 8 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00767 Phco-Chr9 5663864 5666622 Dispersed/Transposed