Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00762 ATGCTTGTCCCAGAATCATACTCTCTTCGTATAAATTGTGGTGGAAAGCAAGTAACAGTCAATGGAAATGAAACCTATGATGACGACACGGATAATGCAGGACCAGCAAGATTCCACTTAAGTGGAAAAAACTGGGGATTTAGCAGCACTGGTCACTTCATGGATAATGACCGTGCAGAATATTATATTTGGCTAAATCAATCTAAGCTTTTCATGGCTGATGCTGAATTATACATGGATGCACGTGTTTCTCCCATTTCTCTTACTTATTATGGATTTTGCCTGGGAAATGGAAACTACACGGTGAATCTACGCTTTGCAGAGGTCATGTTTACTGAAGATCAAACATATAACAGCCTAGGAAGACGCATATTTGATGTCTACATTCAGGGAAATATGGTGCTGAAGAATTTTAACATTGCAGAAGAAGCAGGAGGAGTTAATAAAGGAATCAAAAAATCATTTACCATTGTGATTAATAGTAACACATTGGAAATCCGCCTATATTGGGCTGGGAAAGGGACAATTGGTATTCCATTTAAATCAGTATATGGTCCTCTCATATCAGCTATTTCTGTAAATCCCAACTTCATCCCTCCCTCAGAAAATGGAAGTAGAATGACTGCAGGTGCAGTGGTTGCAATTGTGGTTAGTGTAGTAGTTTCTCTAGTCCTGGTATTTGGTTTACTTAAGTGGAGAGGCTGTCTAGGACAGAAAAGTTCTTTAGCAAAAGAGCTAAAGGGTTTAAAACTGCAAATGGGTATATTTACCTTGCGACAAATCAAAGTAGCAACAAACAACTTCAACAAAGCCAACAAAATTGGAGAAGGAGGGTTTGGTCCTGTGTACAAGGGAACTTTATCAGATGGTACAATAATAGCAGTCAAGCAGCTTTCTTCCAAATCAAGTCAGGGGAATCGTGAGTTTATAAATGAGCTTGGCATGATTTCAGCTTTGCAACATCCTCGTCTTGTTAAACTTTATGGATGTTGGGTCGAGGGAGATCAATTATTGTTGGTCTATGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTGTTTGGTGCAGAAGAACACCAAATAAAATTGGATTGGCCTACAAGGAAAAAAATATGTGTTGGTATTGCCAAAGGTTTGGCATACCTCCATGAAGAATCGAAATTGAAAATTGTTCATAGGGACATCAAGAGCACTAATGTGTTACTTGATAAAGATCTCAAACCAAAGATATCTGACTTTGGTTTAGCCAAGCTCGATGAAGAGGACAATACCCACATAAGCACTCGAATTGCTGGAACTTATGGATACATGGCTCCCGAGTATGCCATGCATGGCTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATTATAAGTGGGAGGAGCAATATGATTCAACGACTTAAAGAGACACCATTCCATCTTCTTGATTGGGCACATATGCTAAAAGAGAGTGATAATCTAATGGAGTTAGTTGATAGTAGATTGGGTTTGGACTTCAACAAAAAGGAAGTTACCACAATGATCAATGTGGCTCTTTCATGCACCAATGTCACTGCCTCCCTCAGGCCTACAATGTCCTTAGTTGTAAGCATGCTTGAAGGTAGATCTATTGTCCAGGAGTTCATTTCAGAGTCAACTGAGGCATTGGATGGGAAGAAGTTGGAAGCAATACTACACCATTACCAAGAGATAGAAGAAAACAATTTAAGTGAGACCAACAATCAGAGTCTATCAGTGGATGACACATTGGCCACTTCTTCTATATCTGTAACTGATCTATATCCTGTAGACATGAATTCCTCATACTGGGAGAAAAGGGGTTGGTGA 1848 0.3918 MLVPESYSLRINCGGKQVTVNGNETYDDDTDNAGPARFHLSGKNWGFSSTGHFMDNDRAEYYIWLNQSKLFMADAELYMDARVSPISLTYYGFCLGNGNYTVNLRFAEVMFTEDQTYNSLGRRIFDVYIQGNMVLKNFNIAEEAGGVNKGIKKSFTIVINSNTLEIRLYWAGKGTIGIPFKSVYGPLISAISVNPNFIPPSENGSRMTAGAVVAIVVSVVVSLVLVFGLLKWRGCLGQKSSLAKELKGLKLQMGIFTLRQIKVATNNFNKANKIGEGGFGPVYKGTLSDGTIIAVKQLSSKSSQGNREFINELGMISALQHPRLVKLYGCWVEGDQLLLVYEYMENNSLARALFGAEEHQIKLDWPTRKKICVGIAKGLAYLHEESKLKIVHRDIKSTNVLLDKDLKPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIISGRSNMIQRLKETPFHLLDWAHMLKESDNLMELVDSRLGLDFNKKEVTTMINVALSCTNVTASLRPTMSLVVSMLEGRSIVQEFISESTEALDGKKLEAILHHYQEIEENNLSETNNQSLSVDDTLATSSISVTDLYPVDMNSSYWEKRGW 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00762 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 390 402 IPR008271 GO:0004672|GO:0006468
Phco9g00762 615 Gene3D Phosphorylase Kinase; domain 1 236 343 - -
Phco9g00762 615 Pfam Protein kinase domain 268 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00762 615 Gene3D Transferase(Phosphotransferase) domain 1 344 556 - -
Phco9g00762 615 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 6 196 - -
Phco9g00762 615 Pfam Malectin domain 8 191 IPR021720 -
Phco9g00762 615 SMART serkin_6 268 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00762 615 CDD STKc_IRAK 274 541 - -
Phco9g00762 615 FunFam Putative LRR receptor-like serine/threonine-protein kinase 344 551 - -
Phco9g00762 615 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 237 343 - -
Phco9g00762 615 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 33 567 - -
Phco9g00762 615 SUPERFAMILY Protein kinase-like (PK-like) 252 543 IPR011009 -
Phco9g00762 615 ProSiteProfiles Protein kinase domain profile. 268 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00762 615 Gene3D - 4 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00762 Phco-Chr9 5631697 5635205 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco9g00762 Pkinase 8.4e-49 CL0016