Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00756 ATGGTTGAAGAAGAAATCCGAAGGGGTCCCTGGACAGAACAGGAGGACTTCAAACTGGTGTATTTTGTTAACATGTTTGGAGATCGTAGATGGGACTTTATAGCAAAGGTATCAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACCTCCACCCTGATCTCAAACGAGGGAAGCTGACATCCCAAGAAGAACGCCTCGTGACGGAGCTTCATTCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAGCTACCAGGGCGCACTGACAACGAGATCAAGAATTACTGGAGGACCCACATGAGGAAAAAGAAGGCTCTAGAGAAAAAACGAGCATCATCATCATCATCTTCACCTGTGTCTTCTAGTTCTCTATCTTCACTGTTCTCCAGCAATCATGCAGTGGATTCAGATGCTTCCAAAGAGGTTGGAGAGGAGAGCTTTTACGACACAGGTGGATGTGATGACATAATGGGGTTGATCGGTGCTGAAGAGGAAGGGGGTGAAAAGGGGTACTCTTTGGATGATATATGGGAAGATATTGTTATGTCAGAAGAGAAGGACATGTATAATATTCTGCAACCTGTGTATGAAGGGCACAGTGAAGAGGGATGCAACTTCTCTTATCCACCTCCAATGATTTATTCTCCATCATCATGGGAGTTCAATTCTTCTCATCCCTTATGGGTGATGGATGAAGAAGAAAGTAGCATGATGTTGTTTCCTACATTAAGTGACCAATACTATTCCTGCTATGAACAAGGGAATGCATTTCTAACTGGCTAA 801 0.4357 MVEEEIRRGPWTEQEDFKLVYFVNMFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPDLKRGKLTSQEERLVTELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKKALEKKRASSSSSSPVSSSSLSSLFSSNHAVDSDASKEVGEESFYDTGGCDDIMGLIGAEEEGGEKGYSLDDIWEDIVMSEEKDMYNILQPVYEGHSEEGCNFSYPPPMIYSPSSWEFNSSHPLWVMDEEESSMMLFPTLSDQYYSCYEQGNAFLTG 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00756 266 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Phco9g00756 266 Gene3D - 8 60 - -
Phco9g00756 266 FunFam MYB transcription factor 63 132 - -
Phco9g00756 266 CDD SANT 65 106 IPR001005 -
Phco9g00756 266 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Phco9g00756 266 MobiDBLite consensus disorder prediction 111 133 - -
Phco9g00756 266 MobiDBLite consensus disorder prediction 117 133 - -
Phco9g00756 266 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
Phco9g00756 266 CDD SANT 10 55 IPR001005 -
Phco9g00756 266 Gene3D - 64 107 - -
Phco9g00756 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Phco9g00756 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Phco9g00756 266 FunFam Myb transcription factor 8 60 - -
Phco9g00756 266 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 2 136 IPR044676 GO:0003700|GO:0006355|GO:0043565
Phco9g00756 266 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Phco9g00756 266 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Phco9g00756 266 SMART sant 7 57 IPR001005 -
Phco9g00756 266 SMART sant 60 108 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00756 Phco-Chr9 5609055 5610113 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco9g00756 Myb_DNA-binding 8.6e-15 CL0123