Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g00752 | ATGCCCCCACCCACCCTCTCCATACCCAAACCTTTATACTTTATTAAACTCTCCTTCCCTTCTTCTCTTTCACCAATCATCACTTCAAAATCCAAATTTCCAAAGGGTGTTCTGCAACTTCAAGATGCTGATTCGGATAGGAACTGCGGCATAGCATCAAATTCTGCACTAGATATGGCACCAAAGGCAGAGAAGAAGCCAGCGGAGAAGAAGCCGGCGGAGGAGAAGAAGTCGACGGTTGGAGACAAGGCTCCGGCGGAGAAGAAGCCAAAGGCAGGAAAGAAGCTTCCGAAGGAGGGAGGAGCTGGTGGTGATAAGAAGAAGAAGAGAAACAAGAAGAATGTGGAGACGTACAAGATCTACATATTCAAAGTTCTGAAGCAGGTTCACCCTGATATTGGTATCTCCAGCAAGGCCATGGGCATCATGAACAGTTTCATCAACGACATCTTCGAGAAGCTTGCCCAGGAATCTTCTAGACTTGCCCGCTACAACAAGAAACCCACCATCACCTCAAGGGAAATCCAGACTGCGGTCAGACTTGTGCTGCCCGGAGAATTGGCCAAACATGCTGTGTCTGAGGGTACCAAGGCTGTTACTAAGTTCACTAGTTCTTGA | 618 | 0.479 | MPPPTLSIPKPLYFIKLSFPSSLSPIITSKSKFPKGVLQLQDADSDRNCGIASNSALDMAPKAEKKPAEKKPAEEKKSTVGDKAPAEKKPKAGKKLPKEGGAGGDKKKKRNKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS | 205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g00752 | 205 | MobiDBLite | consensus disorder prediction | 44 | 110 | - | - | |
| Phco9g00752 | 205 | SMART | h2b3 | 108 | 204 | IPR000558 | GO:0000786|GO:0003677|GO:0030527 | |
| Phco9g00752 | 205 | Gene3D | Histone, subunit A | 79 | 205 | IPR009072 | GO:0046982 | |
| Phco9g00752 | 205 | PRINTS | Histone H2B signature | 159 | 176 | IPR000558 | GO:0000786|GO:0003677|GO:0030527 | |
| Phco9g00752 | 205 | PRINTS | Histone H2B signature | 176 | 189 | IPR000558 | GO:0000786|GO:0003677|GO:0030527 | |
| Phco9g00752 | 205 | PRINTS | Histone H2B signature | 118 | 136 | IPR000558 | GO:0000786|GO:0003677|GO:0030527 | |
| Phco9g00752 | 205 | PRINTS | Histone H2B signature | 189 | 202 | IPR000558 | GO:0000786|GO:0003677|GO:0030527 | |
| Phco9g00752 | 205 | PRINTS | Histone H2B signature | 137 | 157 | IPR000558 | GO:0000786|GO:0003677|GO:0030527 | |
| Phco9g00752 | 205 | PANTHER | HISTONE H2B | 78 | 204 | IPR000558 | GO:0000786|GO:0003677|GO:0030527 | |
| Phco9g00752 | 205 | MobiDBLite | consensus disorder prediction | 62 | 110 | - | - | |
| Phco9g00752 | 205 | Pfam | Core histone H2A/H2B/H3/H4 | 62 | 181 | IPR007125 | GO:0003677 | |
| Phco9g00752 | 205 | SUPERFAMILY | Histone-fold | 97 | 205 | IPR009072 | GO:0046982 | |
| Phco9g00752 | 205 | ProSitePatterns | Histone H2B signature. | 173 | 195 | IPR000558 | GO:0000786|GO:0003677|GO:0030527 | |
| Phco9g00752 | 205 | FunFam | Histone H2B | 74 | 205 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco9g00752 | Phco-Chr9 | 5565731 | 5569041 | Dispersed/Tandem |