Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00734 ATGGAGAGTGGAAATGAGGAGTTGGAGATGGGAGGGTCTAACGGGGTTGCAGCGAGTTCACGGTGGAACCCTACAAAAGAGCAAATAAGCATGCTAGAGAACCTGTATAAGCAGGGAATAAAGACTCCCAGTGCTGAGGAGATACAGCAGATAACTGCTAGGCTTAGGGCGTATGGTCACATCGAAGGAAAGAATGTCTTCTACTGGTTTCAGAATCACAAAGCTAGGCAGAGACAGAAGCAGAAGCAAGAAACCATCGCTTACTTCAATCGCTTTCTTCATACTCCCCAGCCCTTTTTTTCTCCGCCAATTTGCCCAAATGGCCTGTGCCCTCCATATTGTGTACCTCAGGCGCAGAGTGAAAATGGTTTTTATCCCCCACATCCAAAGGTGTTTGTACCAGTAGGTTTTAGGAGAAGCCCATCTGAGATATTTGTGCCCACAGACATGTCAAACATGATCAGCAATGGCCCGCTGGCATACGAAGCCATGCAACAGAGAATCTCGGATTGTAACTTCAGCTACAGTAACCAAGAAACCTTGGATCTCTTTCCTCTGCACCCAACTGGTATTTTGGAAGGGAAAACAACATACCAGGTGTCTTCTCTGGCTTCAGTTTCTGCTGATAGTTCCAGTGATACACCCCCTGCGCCTTCTCCTGATATCAATGAAGATGATCCTTCCCCACTTAACCAACCCTTCTTTGATTTTTTTACTACTTCTGGTCAAGGTTCTTAA 738 0.4607 MESGNEELEMGGSNGVAASSRWNPTKEQISMLENLYKQGIKTPSAEEIQQITARLRAYGHIEGKNVFYWFQNHKARQRQKQKQETIAYFNRFLHTPQPFFSPPICPNGLCPPYCVPQAQSENGFYPPHPKVFVPVGFRRSPSEIFVPTDMSNMISNGPLAYEAMQQRISDCNFSYSNQETLDLFPLHPTGILEGKTTYQVSSLASVSADSSSDTPPAPSPDINEDDPSPLNQPFFDFFTTSGQGS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00734 245 Pfam Homeodomain 19 79 IPR001356 GO:0003677
Phco9g00734 245 Gene3D - 19 87 - -
Phco9g00734 245 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 9 210 IPR044555 GO:0003700|GO:0099402
Phco9g00734 245 MobiDBLite consensus disorder prediction 1 20 - -
Phco9g00734 245 CDD homeodomain 21 81 IPR001356 GO:0003677
Phco9g00734 245 FunFam WUSCHEL-related homeobox 4 19 86 - -
Phco9g00734 245 SMART HOX_1 17 84 IPR001356 GO:0003677
Phco9g00734 245 ProSiteProfiles 'Homeobox' domain profile. 15 80 IPR001356 GO:0003677
Phco9g00734 245 MobiDBLite consensus disorder prediction 203 245 - -
Phco9g00734 245 SUPERFAMILY Homeodomain-like 20 86 IPR009057 -
Phco9g00734 245 MobiDBLite consensus disorder prediction 203 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00734 Phco-Chr9 5449690 5451054 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco9g00734 Homeodomain 5.3e-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00734 9 5449690 5451054 Phco9g00734 9 5449690 5451054 ECH