Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00733 ATGGTTTTCTCCTCTATTCCAGTCTTTGTAGATCCTCCCAATTGGCAGCAGCAACCGAACCATCCTCAAGCCAATGGCAGTGATAACACTCAGCTTCTTCCACCTTTGCCACCACAGCAGACTCATGTGGGAGGTTCCGTGGGATCAATCAGACCAGGTTCTATGGCTGATCGAGCTAGGCTAGCTAAGATACCTCCTCCTGAAGCAGCTCTCAAGTGTCCACGTTGTGAATCCACCAACACTAAATTTTGCTATTTCAACAACTATAGCCTCTCTCAACCACGCCACTTCTGCAAGACTTGTAGGCGTTATTGGACAAGAGGGGGTGCTCTAAGAAACGTTCCTGTGGGTGGAGGGTGCCGTAGGAACAAGAAGAACAAAAGGAGTCGCTCTAAGTCTCCTGTATCATCTGAGAAACAAGCACTCTCTGGTTCTTCTGGTGCACTCCCCTCTGGTGGAAACACTCACGAGCTTATAGGCCAGTTGCCACAACCACCGAACCTTCCCTTCATGGCATCCCTCCAGAACCTCAACCTGAACCGTTATGCTGTTGGAAACATGGGTCTCGGGTTGCGTGAGATTCACGGACAGAACGATCACATGGGGTTTCAAATTGGTGGCAGCGGTAATTCCTCTGCTGGTGGAGGAATGGATCAGTGGCGCTTGCAGCAGATTCCTTTCTTGAATGGTTTTGAATCAGCTTCAGCTGGTTCATACCATTTTCAAAATGAAAGTATTGAAACACCTTCTGGGTTGGTTGGAGATTTAGCAACGAATTCTAGGGTTTCTCAGATTCCATCGGTTAAAATGGAAGAAAGTGGAGCTTTAAATTTGTCTAGATCACCACTGAACGTCTCAGAAAATAACCACTACTATTCATGGACTGATATGTCAGGTCTTTCCTCTTCTTCTGCTAGTCATCTCTTGTAA 930 0.4688 MVFSSIPVFVDPPNWQQQPNHPQANGSDNTQLLPPLPPQQTHVGGSVGSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPVSSEKQALSGSSGALPSGGNTHELIGQLPQPPNLPFMASLQNLNLNRYAVGNMGLGLREIHGQNDHMGFQIGGSGNSSAGGGMDQWRLQQIPFLNGFESASAGSYHFQNESIETPSGLVGDLATNSRVSQIPSVKMEESGALNLSRSPLNVSENNHYYSWTDMSGLSSSSASHLL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00733 309 MobiDBLite consensus disorder prediction 11 47 - -
Phco9g00733 309 ProSitePatterns Zinc finger Dof-type signature. 73 109 IPR003851 GO:0003677|GO:0006355
Phco9g00733 309 Pfam Dof domain, zinc finger 70 125 IPR003851 GO:0003677|GO:0006355
Phco9g00733 309 MobiDBLite consensus disorder prediction 11 53 - -
Phco9g00733 309 ProSiteProfiles Zinc finger Dof-type profile. 71 125 IPR003851 GO:0003677|GO:0006355
Phco9g00733 309 MobiDBLite consensus disorder prediction 115 162 - -
Phco9g00733 309 MobiDBLite consensus disorder prediction 135 161 - -
Phco9g00733 309 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 43 223 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00733 Phco-Chr9 5421730 5422849 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Phco9g00733 zf-Dof 1.8e-32 No_clan