Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00722 ATGACACGAGGGTATTATAAAATTAGGATATTCCGATATGGGACATGGATGACGAGTAGTGAGCGTGTTGAGACTCCCTTGCGTGAAGTGTGGTCAACATTAAAACAGCAAGTGGCAAAAGAAAACTTGTGTCCCTCGCTTCCTGCATCTCCCTGTAGGCTACCTGTACTTTCTTCCATTCTCCTTCTTCCTATAACCCCTGATTCAGCTTTACTTCAAACAGGCAACAAGGCTCAAGGAATCAGTATTCCTTCTATCATGGGAGTTTGTTTGAGCACCAAACCTAAAACTGGGTTAAAATCAAAGCATGTGAGTGTCGAGGCCAAAGATCTCAGCAGTCCAAGTAGTAAAATTACGAAAGATCTCTGTAGCACAATTAGTAAGGTCTCTGAGGTTTCGGTGCCTCATACTCTTCAGAGTGGAGGTGAGATCTTGCATTCATCCAGTCTGAAGAGCTTTAGTTTGACAGAACTTACTGCTGCCACAAGAAATTTCCGTAAGGACAGTGTGTTAGGAGAGGGTGGTTTTGGATCAGTTTTTAAGGGCTGGATTGACGATCACTCACTTTCTGCAACCAAACCTGGAACGGGGGTTGTTGTTGCTGTGAAAAGACTTAGCCAGGATAGCTTCCAAGGTCACGAGGAGTGGTTGGCAAGGCATGGTATGACTCATGAAGCAAGTCTCGAGGATGAAGTAAACTATCTAGGACAGCTTTCTCATCCTCATCTAGTGAAATTAATTGGATATTGCTTTGAAGATAGAGACCGTCTACTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTTCAACCTCTTTCTTGGGGCCTGCGTTTGAAAGTCGCTCTTGGTGCTGCCAAGGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATCGAGATTTCAAGACCTCAAATGTCTTGCTGGATTCAAATTATAATGCAAAGCTTGCTGATTTGGGGCTCTCAAAGGACGCACCTACACGTGACAAAAGTCGTGTCTCCACCAGAGTAATGGGAACCTACGGATATGCAGCTCCAGAATATCTAGCCACAGGCCATGTGAGTGGTAAGAGTGATGTCTTCAGTTTTGGAGTTGTGCTGCTAGAACTGTTATCTGGCAGGAGGGCTGTGGACAAGAACAGACCATCAGGACAGCACAATTTGGTGGAATGGGCAAAGCCATACATGGCAAACAAGAGAAAGCTTTTGAGTGTGTTAGATAACCGTCTTGAAGGCCAATATGATATAGATGAGGCTTTTAAGGTAGCTACCCTCTCTCTGCGATGCCTTGCAACAGAATCCAAGTTTAGACCAAACATGCAAGAAGTAGTCACAGATTTGGAGCAGTTGCAGGTTCCCCATGTACATCATAATCGTTCTGTGAATACTTCTCGTGGTCGTAGAAAAAGTGCTGATGATTTAATCCATGGTAGAAGCGTTACAACTTCAGTTTCCCCCCTCTCACATGACATTGCAAATACACGTCCTTGA 1527 0.4414 MTRGYYKIRIFRYGTWMTSSERVETPLREVWSTLKQQVAKENLCPSLPASPCRLPVLSSILLLPITPDSALLQTGNKAQGISIPSIMGVCLSTKPKTGLKSKHVSVEAKDLSSPSSKITKDLCSTISKVSEVSVPHTLQSGGEILHSSSLKSFSLTELTAATRNFRKDSVLGEGGFGSVFKGWIDDHSLSATKPGTGVVVAVKRLSQDSFQGHEEWLARHGMTHEASLEDEVNYLGQLSHPHLVKLIGYCFEDRDRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLADLGLSKDAPTRDKSRVSTRVMGTYGYAAPEYLATGHVSGKSDVFSFGVVLLELLSGRRAVDKNRPSGQHNLVEWAKPYMANKRKLLSVLDNRLEGQYDIDEAFKVATLSLRCLATESKFRPNMQEVVTDLEQLQVPHVHHNRSVNTSRGRRKSADDLIHGRSVTTSVSPLSHDIANTRP 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00722 508 SUPERFAMILY Protein kinase-like (PK-like) 149 463 IPR011009 -
Phco9g00722 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Phco9g00722 508 FunFam Serine/threonine-protein kinase BIK1 132 262 - -
Phco9g00722 508 Gene3D Phosphorylase Kinase; domain 1 142 262 - -
Phco9g00722 508 Pfam Protein tyrosine and serine/threonine kinase 168 459 IPR001245 GO:0004672|GO:0006468
Phco9g00722 508 MobiDBLite consensus disorder prediction 466 491 - -
Phco9g00722 508 ProSitePatterns Protein kinases ATP-binding region signature. 171 203 IPR017441 GO:0005524
Phco9g00722 508 ProSiteProfiles Protein kinase domain profile. 165 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00722 508 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 263 473 - -
Phco9g00722 508 PANTHER OS01G0588500 PROTEIN-RELATED 114 463 - -
Phco9g00722 508 Gene3D Transferase(Phosphotransferase) domain 1 263 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00722 Phco-Chr9 5344010 5347751 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco9g00722 PK_Tyr_Ser-Thr 9e-41 CL0016