Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00721 ATGAAGTGCTTCTACTTCTCCAACGCAGACGACGAAGATTGCGTGGCAGCGGCACCGAGTTCGCGCTGTTCCACTTCGCGCGTGTCGTGGGCGCGTTCGCTCAGTCTCATGGACACGCGCAGCCGCTCCAACTTCGACTCCGACTCAACGGAATTCTCCGACACGGTGGACTTCCATCACTTCCTGGTCCAGCGCCGCGCCAACGACCTCCGCCTATTCCCCTTCTCAGCGCTGAAGTGCGCCACGCGCGGGTTCAGCCGCGCCCTCCTCGTAGGCGAGGGGGGGTTCGGGTCCGTGTACCGCGGCGTGGTGGAGGAAAAGGAGGTGGCGATCAAGCAGTTGAACCGCAACGGGCAGCAGGGGCACAAGGAGTGGATCAACGAGGTGAATTTGTTGGGAGTGGTGAAGCATCCTAATCTGGTGCGGTTGGTAGGGTACTGTGCTGAGGACGATGAAAGAGGGATTCAGAGGCTTCTGGTTTACGAGTTTATGCCGAATAAGAGCTTGGAGGAGCATCTCTTGGCGCGAGTCCCTTCCACGGTTCTGCCTTGGGGGACCAGGTTGAGAATTGCGCAAGATGCGGCTCGGGGTTTGGCTTATCTTCATGAAGAAATGGATTTTCAGCTAATATTTCGGGATTTTAAGGCGTCCAACATCCTACTGGATGAGAACTTCAATGCAAAGCTTTCTGATTTTGGACTGGCTAGGCAAGGACCTTCAGAAGGGTCTGGCTATGTTTCAACAGCTGTTGTTGGCACCATAGGTTATGCTGCACCAGAGTATGTTCAGACTGGTAAGCTAACTGCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTACGAGCTAATCACTGGGAGGAGAGCTGTAGAGAGAAACCTACCTAAAACTGAACAAAAGCTTTTAGAGTGGGTTAGACCTTATGCTTCTGATCCTAGGAAGTTCCATCATATTGTAGACCCTCGACTTAAGGGACAATACTGCATCAAATCAGCTCATAAAATTGCAATCCTAGCAAACAAGTGCCTCATGAAACAGCCAAAGTCTCGCCCAAAAATGAGTGAGGTGGTCGACTCTCTTGGAAGCATTATTATTGAGACAGATACTCGGGATGAATGCTTTCCCCAAGCTGCTGTAGCCGCCCGAGAAGAAAAAGAAGAGAAGGTATCTGTAGAGGAAACTGAACCTGAACCAGCTAAACAAGGGAACAATTACCTGAAGAAGGTTTTTGAATTCAAAGACATGGTCAGCTTAAGAAACAAGTCTATTGGAAGGTTGGATTGGAAAAGTTGGGCGCCTGGACTAGTAAGAAGTTGGTGA 1320 0.5053 MKCFYFSNADDEDCVAAAPSSRCSTSRVSWARSLSLMDTRSRSNFDSDSTEFSDTVDFHHFLVQRRANDLRLFPFSALKCATRGFSRALLVGEGGFGSVYRGVVEEKEVAIKQLNRNGQQGHKEWINEVNLLGVVKHPNLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEEHLLARVPSTVLPWGTRLRIAQDAARGLAYLHEEMDFQLIFRDFKASNILLDENFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPKTEQKLLEWVRPYASDPRKFHHIVDPRLKGQYCIKSAHKIAILANKCLMKQPKSRPKMSEVVDSLGSIIIETDTRDECFPQAAVAAREEKEEKVSVEETEPEPAKQGNNYLKKVFEFKDMVSLRNKSIGRLDWKSWAPGLVRSW 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00721 439 ProSitePatterns Protein kinases ATP-binding region signature. 91 112 IPR017441 GO:0005524
Phco9g00721 439 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 164 373 - -
Phco9g00721 439 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Phco9g00721 439 Gene3D Transferase(Phosphotransferase) domain 1 164 382 - -
Phco9g00721 439 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 59 163 - -
Phco9g00721 439 PANTHER OS01G0588500 PROTEIN-RELATED 52 362 - -
Phco9g00721 439 Gene3D Phosphorylase Kinase; domain 1 64 163 - -
Phco9g00721 439 CDD STKc_IRAK 91 363 - -
Phco9g00721 439 ProSiteProfiles Protein kinase domain profile. 85 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00721 439 Pfam Protein kinase domain 90 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00721 Phco-Chr9 5336825 5339186 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco9g00721 Pkinase 2.2e-48 CL0016