Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00711 ATGCTCTCCATGGATTCCCTTTTGGATAATTTTCCTGGTTCTGTAAATGGATTTATATTTGAAAACGGTTCTGACTCGTTGTTTACGAATCAGAACAGGGTAAGTGAGTTCAAGTTCGATGATTCATCTGTCTCGGTCTTTACGAATCAGAACAGGGCAATTGAGTTCCAGTTGGATGATTCACGTTCCCCTTCAGAGTCTGCCACTGATTATGCTCCCTCTTCTGGGACAAGCTCTGACGGAGAACACGCCGAGAGTACTAAACACTCCAATCCCATTCTCAGGTACATAAGTGATATCCTTATGGAAGAAGAGGATGATTTGGAGCGCAAACCCTGCATGTTGCAGGATTGTCTGAGACTCCAGGCTGCTGAAAAATCTTTCTATGATGCTTTGGTTCATAGTCACCCATCATCACCTCGTCGATTTAATGATAACCCTGACCCAGATGATAATTTTGCTGGAACCACTAGTTCTGAGAGTTATAGCAGTTATACCACTGACAATTCATATGAGTCTGATCGGTTTAACGGTGCTGGTGATTTTGAGTCTTCTTTCCTGCAAAGATCGCTGCATAATTCTCCGGAACACGCTTATGTTGCTCCTGATCTGATTAGAGAGGCACAAGCTGGGTTCCATTTTTCAAATGGAGTCTGGAAGTTGATTCAGTCGCAGAACAAGGCAGGCGTGATTGAAGAGGGTGTGACGAGGACAGCCAAAGGATCAAGGGAGAAGAGGAGCCATCTCATGAACGATGATGTCTCACATGAAGAAGAGGAGAGAAGCAATAAGCTTTCAGCTGTCTATTCTGATGATTCGGAGCCGTCTAGCATGTTCGATGAAGTGCTGCTTTGCAAGCATGGTAAGAGTCCATCCATTTTTAAGTCTGACCGTGAACCGTCATCATCACAGATTGCTGATTCGGGAGGATCTAATGGAAAGACAACACGTTCGAAGAAAGGTTCCAACAAGGGAAAAAGTGCAAGAACAACGGTGGATTTATGGACTTTGCTATCTCAATGCGCACAAGCTGTGGCTAGCTTTGACCCGAGGAATGCAAATGAAATCCTCAAGCAGATTAGGCAGCACTCTTCACCTTTAGGCGATGGACTTCAGCGTCTGGCTCACTACTTTGCCGATGGCCTAGAGACAAGGTTAGCTGCTGGAACACCAAAGTTCATGCTCTTTCAGTCAGCATCTGCTGCAGACATGTTGAAAGCTTACCGAGTGTACGTCACAGCATCACCATTTCACTGGATGTCATATTTCCTGGCTAACCGTACTATTCTGAAGTTATCACAAAGTGAAAGCAGTCTTCACATTATTGACTTTGGGATTAGCTATGGTTTCCAGTGGCCTTGCCTCATCCAAGGGCTTTCAGAGAGAACAGGCGGTCCTCCAAGACTTCGTATAACAGGAATCGATCTCCCTCAGCCAGGATTTAGGCCAGCAGAAAGGGTAGAGGAGACGGGGCGGCGCCTAGAGAAGTACTGCAAGAGGTTTGGGGTCCCGTTTGAGTACAATTGCCTTGCTCAGAAATGGGAAACTATAAGACTTGAGGATCTCAAACTTGATAGGAATGAAGTTACTGTGGTTAACTGTTTGTACAGATTGAAGAACCTGTCGGATGAAACTGTGACTGCAAACTGTCCAAGGGATGCTGTGCTGAGGTTGATCAGGAGGATCAATCCAACCATCTTCATGCACGGGGTTGTGAATGGCACCTACAATGCACCATTCTTCCTGACAAGGTTCAGGGAAGCACTCTTCCACTTCTCAGCATTGTATGATATGTTTGAAGCTAATGTGCCTCGGGAAGATCCATCTAGGCTTATGTTTGAGAAAGGGTTGTTTGGAAGGGACGCAATCAATGTCATAGCATGTGAGGGGGCAGAGAGGGTTGAAAGGCCAGAGACCTACAAGCAATGGCAGGTTAGGAACCAGAGAGCAAGGTTCAAGCAACTTCCATTGGCCACAGAGCTCGTGAACAGAGTAAAGGAAATGGTGAAGAAGGAATATCATAAAGATTTTACAGTTGATGAGGATGGCAAGTGGGTTTTGCAAGGATGGAAAGGGCGTATTCTATTTGCTCTTTCTTCTTGGGTTCCTGCTTGA 2115 0.4553 MLSMDSLLDNFPGSVNGFIFENGSDSLFTNQNRVSEFKFDDSSVSVFTNQNRAIEFQLDDSRSPSESATDYAPSSGTSSDGEHAESTKHSNPILRYISDILMEEEDDLERKPCMLQDCLRLQAAEKSFYDALVHSHPSSPRRFNDNPDPDDNFAGTTSSESYSSYTTDNSYESDRFNGAGDFESSFLQRSLHNSPEHAYVAPDLIREAQAGFHFSNGVWKLIQSQNKAGVIEEGVTRTAKGSREKRSHLMNDDVSHEEEERSNKLSAVYSDDSEPSSMFDEVLLCKHGKSPSIFKSDREPSSSQIADSGGSNGKTTRSKKGSNKGKSARTTVDLWTLLSQCAQAVASFDPRNANEILKQIRQHSSPLGDGLQRLAHYFADGLETRLAAGTPKFMLFQSASAADMLKAYRVYVTASPFHWMSYFLANRTILKLSQSESSLHIIDFGISYGFQWPCLIQGLSERTGGPPRLRITGIDLPQPGFRPAERVEETGRRLEKYCKRFGVPFEYNCLAQKWETIRLEDLKLDRNEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPTIFMHGVVNGTYNAPFFLTRFREALFHFSALYDMFEANVPREDPSRLMFEKGLFGRDAINVIACEGAERVERPETYKQWQVRNQRARFKQLPLATELVNRVKEMVKKEYHKDFTVDEDGKWVLQGWKGRILFALSSWVPA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00711 704 Pfam GRAS domain family 336 701 IPR005202 -
Phco9g00711 704 ProSiteProfiles GRAS family profile. 325 702 IPR005202 -
Phco9g00711 704 MobiDBLite consensus disorder prediction 58 81 - -
Phco9g00711 704 MobiDBLite consensus disorder prediction 150 169 - -
Phco9g00711 704 MobiDBLite consensus disorder prediction 295 318 - -
Phco9g00711 704 MobiDBLite consensus disorder prediction 135 169 - -
Phco9g00711 704 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 264 696 IPR005202 -
Phco9g00711 704 MobiDBLite consensus disorder prediction 58 89 - -
Phco9g00711 704 MobiDBLite consensus disorder prediction 237 267 - -
Phco9g00711 704 MobiDBLite consensus disorder prediction 291 327 - -
Phco9g00711 704 MobiDBLite consensus disorder prediction 233 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00711 Phco-Chr9 5247727 5249841 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g00711 GRAS 1.1e-111 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01649 10 39167394 39169334 Phco9g00711 9 5247727 5249841 PCT