Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00707 ATGGGACCATACAGCGTAGGTGAAAATCAATCCTCTTCAGGTCTAAAATACGATATTGGTGCAAGCAGAGCCAAAATGGTCACAACTGTTCCTTCATCACCAACACTTTTTGTGGCGTTCCTCTTTGTCACAAGCTTCCTTGTTCTCGCCACTAGTTCAAAGCATGGAAGCGTTACAAGGCACTACAAGTTTGATATAAGGTTGAGAAATGTTACGAGGCTGTGCCACACAAAGAGCATGGTTACAGTGAACGGAAAGTTCCCTGGTCCTAGAGTTGCTGCAAGAGAAGGTGACAGAATTGTGGTTAAGGTGGTCAATCATGTTCCAAACAATGTCACCATACACTGGCATGGAGTGAGACAGCTTCGAAGTGGATGGGCAGATGGTCCATCTTACATAACTCAGTGTCCCATTCAAACTGGCCAGAGTTATGTGTACAACTTCACCATTGTTGGACAAAGAGGAACCCTCTTCTGGCATGCTCACATCTCATGGTTAAGAGCCACTCTCTATGGACCTCTTATCCTCCTCCCCAGGAGCAATGAATCTTACCCATTTGAAAACCCCTACAAGGAAGTTCCCATTCTCTTTGGTGAGTGGTGGAACGCAGATCCAGAGGCTGTTATTGCACAAGCCCTTCAGTCAGGGAGTGGTCCAAATGTTTCAGATGCCCACACCTTTAACGGATTTCCTGGACCCCTCTACAATTGCTCCAATAACGAGACATTCAGGCTAAAGGTGAAACCAGGGAAGACATACCTTCTTCGTTTGATCAATGCTGCACTCAATGACGAGCTCTTTTTCAGCATTGCAAACCACACCCTGGTGATTGTTGAAGCTGATGCTACTTACGTTAAACCTTTTGAGTCCAAGATCATAGTACTAGGACCTGGACAAACCTCAAACGTTCTGTTAAAGACAAAACCTGAGTACCCAAATGCCACTTTCTTCATGCTAGCAAGGCCATATTTCACTGGCATGGGCACTTTCGACAATTCCACAGTTGCTGGCATTCTAGAGTACAAGAAACCACTTGCTCCCAAAAACATTCCCACTTTTAAACCCTCCCTTCCAGCCATCAACGACACTTCCTTCGTTGCCAACTTCTCAAGCAAATTTCGCAGTTTGAACACTGCCAAGTACCCTGCCAAGGTACCTCAAAAAGTTGACAAGAGCTTTTTCTTCACGGTTGGACTTGGAACAAGTCCCTGCCCCAAAAACCAAACATGCCAAGGACCAAACAACAGTTCAAAATTTGCAGCCTCGATGAACAATATATCTTTCACTCTTCCTTCTATAGCACTTCTTCAGCAACATTTCTTTGGGCAGGCTAATAACGGCATTTACACCACTGATTTTCCTGCTGTGCCACTGAGGACATTCAACTACACGGGGACCCCACCAAACAACACAAGGGTCACCAATGGAACCAAGACTGTGGTCATACCCTTTAACACAAACGTGCAAGTGGTGCTTCAGGATACTAGCATTTTAGGAGCTGAGAGCCACCCTTTGCACCTTCATGGCTTTAATTTCTATGTCGTGGGTCAAGGCTTTGGGAACTTTAATCCCATCACTGACCTTCCAAACTTCAATCTGGTTGACCCCGTTGAAAGGAACACTGTTGGTGTGCCCTCTGGTGGTTGGGTTGCAATCCGATTTCTTGCTGACAACCCAGGTGTGTGGCTGATGCACTGTCACTTTGATGTGCACCTTAGTTGGGGGTTGAGGATGGCTTGGATTGTTGAGGATGGGAAGCTCCCTAATCAGAAGTTGCCTCCTCCACCACCTGATCTGCCCAAGTGTTGA 1809 0.4616 MGPYSVGENQSSSGLKYDIGASRAKMVTTVPSSPTLFVAFLFVTSFLVLATSSKHGSVTRHYKFDIRLRNVTRLCHTKSMVTVNGKFPGPRVAAREGDRIVVKVVNHVPNNVTIHWHGVRQLRSGWADGPSYITQCPIQTGQSYVYNFTIVGQRGTLFWHAHISWLRATLYGPLILLPRSNESYPFENPYKEVPILFGEWWNADPEAVIAQALQSGSGPNVSDAHTFNGFPGPLYNCSNNETFRLKVKPGKTYLLRLINAALNDELFFSIANHTLVIVEADATYVKPFESKIIVLGPGQTSNVLLKTKPEYPNATFFMLARPYFTGMGTFDNSTVAGILEYKKPLAPKNIPTFKPSLPAINDTSFVANFSSKFRSLNTAKYPAKVPQKVDKSFFFTVGLGTSPCPKNQTCQGPNNSSKFAASMNNISFTLPSIALLQQHFFGQANNGIYTTDFPAVPLRTFNYTGTPPNNTRVTNGTKTVVIPFNTNVQVVLQDTSILGAESHPLHLHGFNFYVVGQGFGNFNPITDLPNFNLVDPVERNTVGVPSGGWVAIRFLADNPGVWLMHCHFDVHLSWGLRMAWIVEDGKLPNQKLPPPPPDLPKC 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00707 602 CDD CuRO_3_LCC_plant 448 585 IPR034289 GO:0005507
Phco9g00707 602 CDD CuRO_2_LCC_plant 193 341 IPR034285 -
Phco9g00707 602 Gene3D - 406 602 IPR008972 -
Phco9g00707 602 Pfam Multicopper oxidase 464 585 IPR011706 GO:0005507|GO:0016491
Phco9g00707 602 SUPERFAMILY Cupredoxins 382 602 IPR008972 -
Phco9g00707 602 Gene3D - 190 379 IPR008972 -
Phco9g00707 602 FunFam Laccase 47 178 - -
Phco9g00707 602 Pfam Multicopper oxidase 69 179 IPR011707 GO:0005507
Phco9g00707 602 CDD CuRO_1_LCC_plant 62 178 IPR034288 GO:0005507
Phco9g00707 602 ProSitePatterns Multicopper oxidases signature 1. 560 580 IPR033138 -
Phco9g00707 602 ProSitePatterns Multicopper oxidases signature 2. 565 576 IPR002355 GO:0005507
Phco9g00707 602 Pfam Multicopper oxidase 192 343 IPR001117 -
Phco9g00707 602 PANTHER MULTI-COPPER OXIDASE 52 590 IPR045087 -
Phco9g00707 602 Gene3D - 47 177 IPR008972 -
Phco9g00707 602 SUPERFAMILY Cupredoxins 55 210 IPR008972 -
Phco9g00707 602 SUPERFAMILY Cupredoxins 187 375 IPR008972 -
Phco9g00707 602 FunFam Laccase 190 379 - -
Phco9g00707 602 NCBIfam laccase 59 602 IPR017761 GO:0046274|GO:0048046|GO:0052716
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00707 Phco-Chr9 5213363 5216553 Dispersed/Wgd