Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00700 ATGGGGGAAGAGGTGAAGACGAGCGAGTACGACGAAGAGCGCGTAATGGAGTGGGAGGTGGGTCTCCCCACTGCCAACGATCTCACGCCTCTCTCGCAGCCGCTGATTCCGCCGGAGCTTGCCAACGCCTTCAGCATATCGCCGGAGCCCCACCGCACCACCCTAGACGTCAACCGCGCCTCCCGCAACACGCTCTCTACGATCCGCGGCGGCGGGAGCGTGCACCAGGCCTTCTCCTCCTCCAACAATCACCACCACGAGGTGGAGGAGGAGGAGGAGGAGGAGGACACCGATCGCGACGGCTCGGGGTCCGATTCCCGGAAGCATCGGAAGATCGAGTGCGTGGCGGAGGAGGCGGACTCGGCTGTGCGGACGGAGAACTCGGCGGAGCGGACGGCGGTGAAGCGGCCGCGGCTGGTGTGGACCCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTAGCGCACCTTGGGATCAAGAACGCGGTGCCGAAGACGATTATGCAATTGATGAACGTGGAAGGGTTGACCCGGGAGAATGTGGCGAGCCATCTTCAGAAGTATCGGCTTTACCTGAAGCGGATGCAGGGTCTCTCCAACGAAGGTCCTTCTTCATCGGATCAGTTATTTGCTTCCACACCTGTGCCTCAGAGTTTGCACGACTCAGCTCCTCCCAGTGCCCATTCACATGGTCACTCTCATGGCCATGCCAGTGCTCATCTCCCTGTTCCCATGATGTCCATGCCCTATCCCCCTCCCATGATGTCCATGCCTGTCCTCGGCATGCCCCATGCCCATGGCCACATGGGCATCACTATGCCTACTTCTTCCGCCACCTCAGCTTACCATCCTTACAACATGCTGCACCAAAGGGATTGGACTCACCTTGCTCCCAGTGATAAATGA 903 0.6035 MGEEVKTSEYDEERVMEWEVGLPTANDLTPLSQPLIPPELANAFSISPEPHRTTLDVNRASRNTLSTIRGGGSVHQAFSSSNNHHHEVEEEEEEEDTDRDGSGSDSRKHRKIECVAEEADSAVRTENSAERTAVKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHDSAPPSAHSHGHSHGHASAHLPVPMMSMPYPPPMMSMPVLGMPHAHGHMGITMPTSSATSAYHPYNMLHQRDWTHLAPSDK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00700 300 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 192 IPR017930 -
Phco9g00700 300 SUPERFAMILY Homeodomain-like 134 193 IPR009057 -
Phco9g00700 300 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 13 270 IPR044841 GO:0003700|GO:0006355
Phco9g00700 300 Gene3D - 132 195 - -
Phco9g00700 300 FunFam Two-component response regulator 132 195 - -
Phco9g00700 300 MobiDBLite consensus disorder prediction 66 81 - -
Phco9g00700 300 Pfam Myb-like DNA-binding domain 140 188 IPR001005 -
Phco9g00700 300 NCBIfam myb-like DNA-binding domain, SHAQKYF class 137 189 IPR006447 GO:0003677
Phco9g00700 300 MobiDBLite consensus disorder prediction 66 112 - -
Phco9g00700 300 MobiDBLite consensus disorder prediction 197 239 - -
Phco9g00700 300 MobiDBLite consensus disorder prediction 197 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00700 Phco-Chr9 5161637 5162539 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco9g00700 Myb_DNA-binding 1.2e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00700 9 5161637 5162539 Phco9g00700 9 5161637 5162539 ECH