Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00693 ATGGAATCTGATCATGATCACCAAGCAGCAATATCTGAAAATCCCTCTGATGGGGAGGACCAAGGTGCAACTCACGTGACATCCAGATCCTACGAGTGCAACTTCTGCAGGAGGGGCTTCTCCAATGCACAAGCACTGGGGGGACACATGAACATCCACAGGAAAGACAAAGCCAAGCTCAAGCAACAACAGTCTTCAAATCAAACTCAAGTTCAACCATCTTTGGACAAGGTTGTCCCTCCACAGGATCAGACCAAGTCTGGTGAAGAACGCAACGCACCAAAATGGAATTGGAATGTGTCTCAAGAAGAACATGTACTCTCTTCTGGAGCCACTCACACAAGGCAGCTTCCACTCTTTGAAGAATCACCAACTAGCAGTGAAACACTAAACCCACAAGGTCAAAATACCACTGTAGGAGCTTTGTTATCTACCCGAGATTCATCATTGGAGTTAGACCTTGAACTCAGACTGGGACCTGAACCACAGGATTCGTCAGCAGAAACGGGTACAAGAAATTTTTTTTGA 528 0.4602 MESDHDHQAAISENPSDGEDQGATHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKLKQQQSSNQTQVQPSLDKVVPPQDQTKSGEERNAPKWNWNVSQEEHVLSSGATHTRQLPLFEESPTSSETLNPQGQNTTVGALLSTRDSSLELDLELRLGPEPQDSSAETGTRNFF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00693 175 MobiDBLite consensus disorder prediction 55 97 - -
Phco9g00693 175 PANTHER OS07G0101800 PROTEIN 10 162 - -
Phco9g00693 175 SUPERFAMILY beta-beta-alpha zinc fingers 28 58 IPR036236 -
Phco9g00693 175 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Phco9g00693 175 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Phco9g00693 175 MobiDBLite consensus disorder prediction 1 27 - -
Phco9g00693 175 MobiDBLite consensus disorder prediction 62 97 - -
Phco9g00693 175 Gene3D Classic Zinc Finger 18 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00693 Phco-Chr9 5125772 5126299 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco9g00693 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00693 9 5125772 5126299 Phco9g00693 9 5125772 5126299 ECH