Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g00685 | ATGCGGCAATGGAAACAGCTGGGAGAGGTGTTGGTGGCGGCTTCTATCACCAACACACTATCCCACTCTCACGCTGCAACGCTCAATCTCCCACGCGCCGTCGCTCTCGGACTCACCCAACCCCTTATTCTCAAAATCCTTTCAAACCAGTCGATTCACCCTTCGCAGAAGCTTCGTTTCTTAGAATGGTCTCGCTCCCACCACAACCCTTCCCCGGCCGCATACTCCCTCGTCCTCCGCTCCCTCACCGGCGGCGGCTTCTTCTCCGAAATCCCCTCCCTCCTCCACTCCATGACGCAAGATGGCGTCGTTCTCGATCCCCACTCCCTCAACCTCCTCCTCCACTCCTTCATTTTCTCCTCGAACTTCAATTTAGCTTTTCAATTGCTAGATTACGTGCAGCACCTTCAGCTCGATGCCAGCACAATCTACAACTCCCTCATCGCTGCTTTACTCACAAAAAACCAACTCTCTCTCGCGTTATCCATCTTCTTCAAGCTCCTCGACGCGGTTGATTCGAAGTCCATCGCGTGCAACCAGTTGTTGGTTGCTCTGAGAAAAGCAGATATGAGGGTGGAGTTTAAGCAAGTGTTTACAAAATTGAGGGAGAAGAAAGGGTTTTCGTTTGATACGTGGGGTTACAATGTGTGTATTCACGCTTTTGGTTGTTGGGGTGATTTGGCTTCTTGCTTCGCGCTTTTCAAGGAGATGAAAGACGATGGTAAGGGGTTGGTTGCTCCTGATTTGTGCACCTACAACAGTCTCATCACTGCGCTTTGCAGGCTTGGCAAGGTGGATGATGCGCTTGTTGTGTGGGAGGAGCTCAATGCCTCAGTTCACCAACCTGATCGCTTCACCTACACAAACCTAATTCATGCCTGTTGCGGAACTTTTAGGATGGGTGATGCCACAAGGGTTTTTAATCACATGCAGAGCCATGGGTTCCGTCCGGATACGCTTGTTTATAATTCTCTGCTGGATGGACATTTTAAGGCCACCAAGGTTGTTGAAGCCTGCCAGCTGTTTGAGAAAATGGTTCAAGAAGGGGTGAGACCTTCTTGCTGGACTTATAATATTCTCATTCATGGGTTGCTTAGGAATGGCAGGGCGGAAGCTGCGTATACTATGTTTTGTGATCTCAAGAAGAAGGGCCAATTTGTGGATGGGATTACTTACAGCATTGTTGTGTTGCAGCTTTGTAAGGAGGGTCAACTGGAGGAGGCGCTGCAGTTGGTGGAAGAAATGGAAAGCAGAGGTTTTATTGTTGACCTTGTCACCATAACATCGCTGCTGATTAGCATTCATAGGCACGGTCGCTGGGATTGGACGGACCGGCTTATGAACTATATCAAGGAAGGTGATTTGGTAGTTTCCGTTCTAAAGTGGAAAGCTGGAATGGAAGCTTCTATAAAGAACCCTCCTGGCAAGAAAAAGGATTACTCACCTATGTTCCCTTCCAAAGGAGATTTTAGTGACATCATGAGCTTCATGACCCGTGCCCAGGATACCACCAACATTAATGACGGGGAGGAAACTTCTTGCGATGGGATTGACGAGTGGTCATCATCGCCGCACATTGATAAATTGGCCAATCAAATGTGCTCCACTGGCTATTCTTCCCAGCTGTTTACTCCTTCTCGTGGTCAAAGAGTCCAAGAAAAAGGACCGGATTCTTTTGATGTTGATATGGTGAATACTTTCTTGTCTATATTTTTGGCCAAGGGAAAGTTGAGCTTGGCTTGCAAATTGTTTGAGATTTTCAGTGATGCAGGTGTGAGTCCTGTGAGTTATTCTTACAATTCTATCATGAGTTCTTTTGTCAAAAAGGGTTATTTCACTGAGGCTTGGGCTGTTCTGACTGAAATGGGAGAAAGAATTTGTCCTGCTGATACAGCCACATACAATATGATAATTCAAGGTTTAGGAAAGATGGGACGAGCTGATCTAGCTAGTGCTGTTCTTGATAGGCTACTGAAGCAGGGAGGTTATCTTGACATAGTTATGTATAACACTCTCATCAATGCTCTGGGGAAAGCAGGCCGAATCAAAGAGGTGAATAAGCTCTTTGAGCAAATGAGGAATAGTGGGATAAATCCTGATGTTGTCACTTACAATACATTGATTGAAGTTCACAGTAAGGCTGGGCTATTGAAGGATGCTTATAAGTTCTTGAAAATGATGCTGGATGCTGGATGCACCCCTAACCATGTTACAGACACTACTTTAGATTATCTAGGGAGGGAAATTGATAAATTGAGATTCCAAAGGGCATCGATTTTGAGTGAAAAAGATGATCCTTCTTGA | 2304 | 0.4609 | MRQWKQLGEVLVAASITNTLSHSHAATLNLPRAVALGLTQPLILKILSNQSIHPSQKLRFLEWSRSHHNPSPAAYSLVLRSLTGGGFFSEIPSLLHSMTQDGVVLDPHSLNLLLHSFIFSSNFNLAFQLLDYVQHLQLDASTIYNSLIAALLTKNQLSLALSIFFKLLDAVDSKSIACNQLLVALRKADMRVEFKQVFTKLREKKGFSFDTWGYNVCIHAFGCWGDLASCFALFKEMKDDGKGLVAPDLCTYNSLITALCRLGKVDDALVVWEELNASVHQPDRFTYTNLIHACCGTFRMGDATRVFNHMQSHGFRPDTLVYNSLLDGHFKATKVVEACQLFEKMVQEGVRPSCWTYNILIHGLLRNGRAEAAYTMFCDLKKKGQFVDGITYSIVVLQLCKEGQLEEALQLVEEMESRGFIVDLVTITSLLISIHRHGRWDWTDRLMNYIKEGDLVVSVLKWKAGMEASIKNPPGKKKDYSPMFPSKGDFSDIMSFMTRAQDTTNINDGEETSCDGIDEWSSSPHIDKLANQMCSTGYSSQLFTPSRGQRVQEKGPDSFDVDMVNTFLSIFLAKGKLSLACKLFEIFSDAGVSPVSYSYNSIMSSFVKKGYFTEAWAVLTEMGERICPADTATYNMIIQGLGKMGRADLASAVLDRLLKQGGYLDIVMYNTLINALGKAGRIKEVNKLFEQMRNSGINPDVVTYNTLIEVHSKAGLLKDAYKFLKMMLDAGCTPNHVTDTTLDYLGREIDKLRFQRASILSEKDDPS | 767 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g00685 | 767 | Pfam | PPR repeat | 384 | 416 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 633 | 665 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 597 | 630 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 285 | 319 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 250 | 283 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 667 | 701 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 356 | 384 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 702 | 735 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 214 | 241 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 321 | 354 | IPR002885 | - | |
| Phco9g00685 | 767 | NCBIfam | pentatricopeptide repeat | 390 | 423 | IPR002885 | - | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 318 | 352 | IPR002885 | - | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 630 | 664 | IPR002885 | - | |
| Phco9g00685 | 767 | PANTHER | OS03G0856100 PROTEIN | 175 | 459 | - | - | |
| Phco9g00685 | 767 | Pfam | PPR repeat | 143 | 168 | IPR002885 | - | |
| Phco9g00685 | 767 | Pfam | PPR repeat | 214 | 241 | IPR002885 | - | |
| Phco9g00685 | 767 | Gene3D | Tetratricopeptide repeat domain | 173 | 335 | IPR011990 | GO:0005515 | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 665 | 699 | IPR002885 | - | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 353 | 387 | IPR002885 | - | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 248 | 282 | IPR002885 | - | |
| Phco9g00685 | 767 | Gene3D | Tetratricopeptide repeat domain | 487 | 625 | IPR011990 | GO:0005515 | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 283 | 317 | IPR002885 | - | |
| Phco9g00685 | 767 | Gene3D | Tetratricopeptide repeat domain | 40 | 170 | IPR011990 | GO:0005515 | |
| Phco9g00685 | 767 | Gene3D | Tetratricopeptide repeat domain | 336 | 473 | IPR011990 | GO:0005515 | |
| Phco9g00685 | 767 | Gene3D | Tetratricopeptide repeat domain | 627 | 751 | IPR011990 | GO:0005515 | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 388 | 422 | IPR002885 | - | |
| Phco9g00685 | 767 | Pfam | PPR repeat family | 665 | 708 | IPR002885 | - | |
| Phco9g00685 | 767 | Pfam | PPR repeat family | 247 | 295 | IPR002885 | - | |
| Phco9g00685 | 767 | Pfam | PPR repeat family | 596 | 642 | IPR002885 | - | |
| Phco9g00685 | 767 | Pfam | PPR repeat family | 317 | 365 | IPR002885 | - | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 595 | 629 | IPR002885 | - | |
| Phco9g00685 | 767 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 700 | 734 | IPR002885 | - |