Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00675 ATGGCTGATAAAGATACCGTTTATTCAGCAGGAAATGAAAGGAGAATTCCAATTATCAGTTTCTTTAAAGATGCTAGACTAGTTTTCAAATCTGACAATCTTGGTCGTGAAATATTATCAATTGCATTGCCTTCAGCAATGGCTTTGACAGCTGACCCTATTGCTTCACTGGTTGACACAGCATTTATTGGTCAAATAGGTCCAGTGGAGCTTGCAGCTGTAGGGGTGGCCATAGCACTATTCAATCAAATATCAAGAATTGCAATATTCCCACTTGTCAGTGTCACTACCTCTTTTGTGGCTGAGGAAGATACCCTTTCTGGAGCCTGTCTTCAAGTAGAGAAGAATGAATGGTTGGAGGCAGGTCCAATTATAGATGCTGAAACGAAAGAACTAATACCACTTGAAAAAGACACAGGTGGAAATGTGCAAAAATCAGATTTGATTGATATTGACTTTAATATAGTTAAGTTTGAACATAAGAAAAGGCATATCTCTTCTGCTTCATCAGCATTACTTATCGGTGGCATTGTTGGCATCATCCAAGCAATGTTCCTCATATCTGCTGCAAAACCTTTATTGAACTTCATGGGAGTAACCTCAGACTCTCTTATGCTAAACCATGCACATAACTACCTGACATTGAGGTCCCTTGGTGCTCCTGCAGTTCTCCTCTCGTTAACTATGCAGGGAATCTTCCGAGGATTCAAAGACACTAAAACACCTTTATATGCCACATTGGTAGGAGATGTGACCAATGTAGCCCTTGATCCTTTATTCATATTTGTTTTCCGCTTCGGGGTCAGTGGTGCAGCTATTGCTCATGTTATATCTCAGTACCTAATTTCACTTATGCTCCTGTGGAGCTTGATGGAAAAAGTTGATCTTATACCGCCAAGCATCAAGCATCTACAATTTCATCGATTTCTAAAAAATGGCTTTCTATTATTTGTAAGAGTAATTGCTGTAACCTTCTGTGTGACACTGGCAGCAGCATTAGCTGCACGCAAGGGACCAACATCAATGGCTGCATTTCAGGTCTGCCTGCAGATTTGGTTAGCGGTGTCCCTTCTTGCCGATGGTCTGGCTGTTGCCGGACAGGCAATTCTTGCAGGTGCATTTGCTAACAAGGACTATGAGAAGGCCGAAGCAACTGCATCTCGAGTACTACAGCTGGGTTTGGTTCTGGGGTTGGCTCTTGCATTCATTCTTGGGACAGGACTGCATTTTGGAGCTAAACTATTTACCAAAGATGTTAATGTCATTCACCTCATTAGAATTGGGATCCCGTTTGTAGCAGCCACTCAACCCCTCAACGCTTTGGCATTTGTATTTGATGGTATCAACTTTGGGGCATCTGATTTTGCATATTCAGCCATTTCATTGGTTGTGGTGGCAATTGTCAGCATAATTTGTCTACTTGTTTTATCATCTGTTGGCGGTTTCACAGGAATTTGGATTGCTTTGACCATCTTTATGGGTCTTAGAACAATTGTGGGCCTTCTGAGGATTGGAACTGGGTCAGGACCCTGGAAGCTGATTAGGAGCTAA 1551 0.4204 MADKDTVYSAGNERRIPIISFFKDARLVFKSDNLGREILSIALPSAMALTADPIASLVDTAFIGQIGPVELAAVGVAIALFNQISRIAIFPLVSVTTSFVAEEDTLSGACLQVEKNEWLEAGPIIDAETKELIPLEKDTGGNVQKSDLIDIDFNIVKFEHKKRHISSASSALLIGGIVGIIQAMFLISAAKPLLNFMGVTSDSLMLNHAHNYLTLRSLGAPAVLLSLTMQGIFRGFKDTKTPLYATLVGDVTNVALDPLFIFVFRFGVSGAAIAHVISQYLISLMLLWSLMEKVDLIPPSIKHLQFHRFLKNGFLLFVRVIAVTFCVTLAAALAARKGPTSMAAFQVCLQIWLAVSLLADGLAVAGQAILAGAFANKDYEKAEATASRVLQLGLVLGLALAFILGTGLHFGAKLFTKDVNVIHLIRIGIPFVAATQPLNALAFVFDGINFGASDFAYSAISLVVVAIVSIICLLVLSSVGGFTGIWIALTIFMGLRTIVGLLRIGTGSGPWKLIRS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00675 516 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 10 515 IPR044644 -
Phco9g00675 516 NCBIfam MATE family efflux transporter 44 486 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco9g00675 516 CDD MATE_DinF_like 34 506 IPR044644 -
Phco9g00675 516 Pfam MatE 166 259 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco9g00675 516 Pfam MatE 318 471 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00675 Phco-Chr9 5021883 5025803 Dispersed/Wgd