Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00673 ATGAGAAAGCCCGAGGTGTCTGGAAAAAACAACTCCAACGTTAATAACAAGCTTAGAAAGGGGTTGTGGTCACCTGAAGAAGATGACAAGCTCATGAACTACATGCTAAACAGTGGACAAGGTTGTTGGAGCGATGTAGCCAGAAATGCTGGCCTTCAAAGGTGTGGCAAAAGTTGTCGGCTTCGATGGATCAATTACTTGAGGCCTGATCTCAAACGAGGTGCATTCTCTCCACAAGAAGAGGAACTCATTGTCCATTTGCATTCCCTTCTCGGAAACAGATGGTCTCAAATAGCGGCGCGCTTACCTGGAAGAACTGACAATGAAATTAAGAATTTTTGGAATTCAACAATAAAGAAAAGACTCAAGAACTTGTCATCCAACACCTCACCAAATGGAAGCGAGTCCTCATATGACCCTAACAAAGACCTTAACATGGCAGGGTTTACTACTTCTAATACCCATCAAGATCAACTAGCTGATTTTATGCCTATGTTGAATTCATCATCTCCACCATCCATACATGCCACAGTTCTCAATTCCATAATTGACAGGTTGCCTTTGCCAGATCATGGACAAAACATGCCAGTTTCTGGTGGATTCTTCAATGGTACAGAACCATATTTCTCATCGCAAAGTGGAGTTGATCACAAAGGTTTTTATTTGCAAAATGGAGGAGTATTTGGGAGTGTAAATATTGGGGCTGAAGGGGATATGTACGTTCCTCCTCTAGAGAGTGTTAGCACTACTTCTGACCATAACCTGAAAGTTGAGAGCACATGCAACACAGATACTAACAATAGTTACTTTGATGACATAAACAGTGTCATCCTTAATAACTGCAGCAACAAGAGAGCTGAAAATAGGGCTGGGGTGGAGAACTTATTTCAAGAAGAGTTAACCATGGGAGAGTGGGACTTGGAGGAGTTGATGAAAGATGTTTCATCCTTTCCCTTTCTTGATTTTTCAAATATGCAATAA 981 0.4139 MRKPEVSGKNNSNVNNKLRKGLWSPEEDDKLMNYMLNSGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIVHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSNTSPNGSESSYDPNKDLNMAGFTTSNTHQDQLADFMPMLNSSSPPSIHATVLNSIIDRLPLPDHGQNMPVSGGFFNGTEPYFSSQSGVDHKGFYLQNGGVFGSVNIGAEGDMYVPPLESVSTTSDHNLKVESTCNTDTNNSYFDDINSVILNNCSNKRAENRAGVENLFQEELTMGEWDLEELMKDVSSFPFLDFSNMQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00673 326 Gene3D - 17 73 - -
Phco9g00673 326 MobiDBLite consensus disorder prediction 1 20 - -
Phco9g00673 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 67 IPR017930 -
Phco9g00673 326 ProSiteProfiles Myb-like domain profile. 68 118 IPR001005 -
Phco9g00673 326 FunFam MYB transcription factor 17 73 - -
Phco9g00673 326 FunFam Transcription factor MYB46 74 143 - -
Phco9g00673 326 CDD SANT 75 115 IPR001005 -
Phco9g00673 326 MobiDBLite consensus disorder prediction 124 147 - -
Phco9g00673 326 SMART sant 19 69 IPR001005 -
Phco9g00673 326 SMART sant 72 120 IPR001005 -
Phco9g00673 326 ProSiteProfiles Myb-like domain profile. 15 67 IPR001005 -
Phco9g00673 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 122 IPR017930 -
Phco9g00673 326 Pfam Myb-like DNA-binding domain 20 67 IPR001005 -
Phco9g00673 326 Pfam Myb-like DNA-binding domain 73 116 IPR001005 -
Phco9g00673 326 PANTHER MYB DOMAIN PROTEIN 55 14 266 - -
Phco9g00673 326 Gene3D - 74 144 - -
Phco9g00673 326 CDD SANT 23 67 IPR001005 -
Phco9g00673 326 SUPERFAMILY Homeodomain-like 18 114 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00673 Phco-Chr9 5006760 5008721 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco9g00673 Myb_DNA-binding 9.4e-12 CL0123