Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00659 ATGACCAATTCCTACAGATCCAATGACCTTAACTTTTGGTTGGACCTCAATTCACCATGTCTTCTGTCTTCTCCTTCTTCATCAACTCCTCCCATCAATCCATCATTCTATTTTCCTTCCAATTGTCATACCTACACAACTGTCATATCTTCTACTCAGTTCCAATCCTCTCCTCCTCAAACAAAAGCCCTTCCTTTCCTTCATCAAAGACATAAAGAAGAAGAAGCACAATATCTTCAATCTTCATTCAGTGCCATGGAGGTGGACAAGAAAAAGGAAGACCTAAGTACATCCAAGTGCTTGGATGAAGAGGATGCTGTCACCGTGGCTTTACACTTAGGGCTTCCAAGCACTAGTGCATCTGCTGATTTAACTTCAACCCTATACTCAGCAGAGGTTTCAGACAAAGAAGAAAAAACCAGTGATGCTTCGGGGCTACTGTCAGACAGAATTAACAAAGGACAATATTGGATCCCTACTTCTGCTCAGATTCTGATTGGTCCAACACAGTTCGCGTGCCCTCTTTGTTTCAAGACGTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGAAAGGGACCAGAATCTCTAAGGGGAACACAACCAACAGCTATGCTAAGGCTCCCTTGCTATTGCTGTGCTCCAGGATGCAAGAACAACATCGACCATCCGAGAGCAAAACCACTCAAAGACTTTAGAACCCTTCAAACACATTACAAGAGAAAGCATGGGACAAAGCCTTTCGTGTGCAGAAAATGTTGCAAAACATTTGCTGTGAGGGGTGATTGGAGAACTCATGAGAAGAACTGTGGGAAACGCTGGTATTGTTCTTGTGGATCTGATTTCAAGCACAAAAGATCTCTTAAAGATCATATCAAGGCATTTGGATATGGACACACGGCTCATGGAAATGACTGCATGAACCTTGACCAAGATGATGATCAAGCAGGCTCTGAAATTGAACAAGAAAATTAA 996 0.4247 MTNSYRSNDLNFWLDLNSPCLLSSPSSSTPPINPSFYFPSNCHTYTTVISSTQFQSSPPQTKALPFLHQRHKEEEAQYLQSSFSAMEVDKKKEDLSTSKCLDEEDAVTVALHLGLPSTSASADLTSTLYSAEVSDKEEKTSDASGLLSDRINKGQYWIPTSAQILIGPTQFACPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGTKPFVCRKCCKTFAVRGDWRTHEKNCGKRWYCSCGSDFKHKRSLKDHIKAFGYGHTAHGNDCMNLDQDDDQAGSEIEQEN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00659 331 SUPERFAMILY beta-beta-alpha zinc fingers 237 275 IPR036236 -
Phco9g00659 331 ProSitePatterns Zinc finger C2H2 type domain signature. 173 193 IPR013087 -
Phco9g00659 331 Gene3D Classic Zinc Finger 232 308 - -
Phco9g00659 331 PANTHER ZINC FINGER PROTEIN WIP2 45 330 IPR043584 GO:0003700|GO:0010468
Phco9g00659 331 FunFam Zinc finger protein WIP2 224 306 - -
Phco9g00659 331 ProSiteProfiles Zinc finger C2H2 type domain profile. 171 198 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00659 Phco-Chr9 4905710 4907947 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco9g00659 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01688 10 39410332 39417400 Phco9g00659 9 4905710 4907947 PCT