Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00650 ATGGATTCAGAGAGAACAGCTCCTCCCCCGTTGCAGGAGCAGGAACTGGAGCTGGACAACCTCAAAGCCCTCAAAGTCCTAGGAAAAGGTGCCATGGGGACTGTCTTCCTCGTCCACCACACCACCAACAACTCCCCCTTCGCCTTGAAAGTGGTGGACAAAATGAGCGTCCACGCAAAGCTCGACGCGGAACGCCGCGCGCGTTGGGAAATCCAAGTCCTCTCAACCCTCTCCCATCCCTTCCTCCCTTCCCTCATGGGAACATTCGAGTCCCCACAGTTCTTAGCGTGGGCCCTACCCTACTGCCCCGGCGGCGACCTCAACGTCCTCCGCTACCGCCAAACAGACCGCGCCTTCTCCCCCACCGTCATCCGCTTCTACGTAGCGGAAATCCTCTGCGCCCTCCACCACCTCCATTCCATGGGAATTGCATACCGCGACCTCAAACCCGAAAATGTCCTCATCCAAAACAACGGCCACGTCACCCTCACGGATTTCGACCTCTCCCGCAAACTCACCCTCAAGCCTAAACCCCTTCTTCCTCCAATCCCCGTGCCCAATCTCAACCTGCCAGAACCCCGCCGCAAACACCGCCGCAACTTCTCCCGCTGGATCCCCCTCCGCGCCCTCGACGGGAATCGTAGGAAGGCCAACTCCAACGCCCTTAAGAAGGCCAAGTCCGCGCGAGTCAGCCCGGTGAGTAGACGAAAACTGAGTTTCTCCAACGGCGAGCGCTCCAACTCGTTCGTCGGCACCGAGGAGTACGTATCGCCGGAGGTCGTCCGCGGCGACGGGCACGAGTTCGCCGTTGATTGGTGGGCCCTCGGAATACTCATATACGAAATGCTCTACGGTACGACGCCGTTTAAAGGCAAGAATCGCAAGGAAACGTTCCGCAACGTCCTCACCAAGGCACCGGAGTTTGTCGGGAAGAGAACCGCGCTCACGGACCTTATCGAGAAGCTCCTGGTGAAGGATCCGACGAGGCGGTTGGGATACACGCGCGGCGCTGCGGAGATCAAGGAGCATGAGTTCTTCCGAGGGGTGAAGTGGGAGCTTTTGACGGAGGTGGTGCGGCCGCCATTCATTCCCTCGCGGGACGACGGGTCCGCTGAGTCCGTGGAGAGGCTTTCCGCCGGGAATTCTGGCATGGATATTAGGGATTACTTTCAGAATCTGAGATCGTTGCCACCTTCGCCGTCACCGTCGGCATCGCCGCGGTGGAGGTTTAAGAAAAATATTTCTCTAACGGAATTCTAA 1260 0.5857 MDSERTAPPPLQEQELELDNLKALKVLGKGAMGTVFLVHHTTNNSPFALKVVDKMSVHAKLDAERRARWEIQVLSTLSHPFLPSLMGTFESPQFLAWALPYCPGGDLNVLRYRQTDRAFSPTVIRFYVAEILCALHHLHSMGIAYRDLKPENVLIQNNGHVTLTDFDLSRKLTLKPKPLLPPIPVPNLNLPEPRRKHRRNFSRWIPLRALDGNRRKANSNALKKAKSARVSPVSRRKLSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILIYEMLYGTTPFKGKNRKETFRNVLTKAPEFVGKRTALTDLIEKLLVKDPTRRLGYTRGAAEIKEHEFFRGVKWELLTEVVRPPFIPSRDDGSAESVERLSAGNSGMDIRDYFQNLRSLPPSPSPSASPRWRFKKNISLTEF 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00650 419 Gene3D Transferase(Phosphotransferase) domain 1 243 365 - -
Phco9g00650 419 FunFam Serine/threonine-protein kinase UCNL 21 105 - -
Phco9g00650 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Phco9g00650 419 FunFam Serine/threonine-protein kinase OXI1 106 174 - -
Phco9g00650 419 ProSiteProfiles Protein kinase domain profile. 21 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00650 419 Pfam Protein kinase domain 23 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00650 419 Pfam Protein kinase domain 241 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00650 419 FunFam Serine/threonine-protein kinase OXI1 244 365 - -
Phco9g00650 419 PANTHER FLIPPASE KINASE 1-RELATED 13 367 - -
Phco9g00650 419 Gene3D Phosphorylase Kinase; domain 1 21 105 - -
Phco9g00650 419 SMART serkin_6 21 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00650 419 Gene3D Transferase(Phosphotransferase) domain 1 106 172 - -
Phco9g00650 419 SUPERFAMILY Protein kinase-like (PK-like) 18 395 IPR011009 -
Phco9g00650 419 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00650 Phco-Chr9 4805564 4806823 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Phco9g00650 Pkinase 7.1e-36 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01691 10 39428598 39429734 Phco9g00650 9 4805564 4806823 PCT