Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00648 ATGAGTTTCAGCGTCACTTTGTTGGCTGCACCTGCACTTTACTCTAACCTGCTTTGTTTTCTAGTGCCTATATGTATATTCTTAAGTATATCACTACCTTTTCATTTGTTTTTCTTATTCAACTTCTTCAACGTACTACTTATTAACTTCAGGAGGATGAAGGCTTTCTTGTTTGTGTTTGTGGCCCTTACGTTGTGTGGTTATGCTGTTGCTAAAGAGTGCACAAACATTCCTACACAATCTCATACATTCAGGTATGAGCTATTGACATCAAAGAATGCAACATGGAGGGCGGAGGTGATGTCTCACTACCATTTGACTCCAACGGATGAAACTGCTTGGGCTGATTTGCTTCCGAGGAAGTTCTTGACAGAACAGAACCAACATGATTGGGGGATGATGTACAGGAAAATTAAGAACACGGGTGTGTCCAAGTCACCTGAAGGATTTCTGAAAGAAGTACCTCTTGGGGATGTGAGATTGCATAAGGATTCAATCCATGGCAGAGCACAGCAGACAAACTTGGAGTATCTGTTGATGTTAGATGTGGACAGATTGATTTGGAGCTTTAGGAAGACAGCTGGTCTATCCACACCTGGGACTCCTTATGGAGGGTGGGAAGGTCCAGAAGTTGAGCTTCGGGGTCATTTTGTTGGGCATTACTTGAGCGCATCAGCTCTAATGTGGGCCAGCACACAGGATGATAGCCTGAAGCAGAAAATGCAATCTCTTGTTGCTGGCCTGTCTGCTTGTCAGGAGAAAATAGGGACTGGATATCTATCTGCATTTCCATCTGAGTTTTTTGATCGATTTGAATCTGTTCGAGAAGTTTGGGCTCCCTATTATACCATTCACAAGATTTTGGCTGGCCTCTTGGATCAACATACATTTGCTGGAAACCCTCAAGCTCTAAAAATGGTAAAGTGGATGGTTGATTACTTCTACGACAGAGTGCAGAATGTAATAACAAAGTACACTATAAATAGACACTATCAATCACTGAACGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATATAGCATAACAGGGGATTCTAAACATCTATTGTTGGCTCACCTTTTTGACAAGCCCTGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATAGCTGATTTTCATGCTAATACACATATCCCAGTTGTTGTTGGATCTCAAATGCGATATGAAGTCACAGGCGATCCACTTTATAAGGAAATTGGGACTTTCTTTATGGACCTCGTAAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAGTCAGCGAGTTTTGGAGTAATCCAAAGAGAATAGCAGACAACTTAAGAACGACAGAGAATGAAGAGTCATGCACGACTTATAATATGTTGAAGGTTTCACGTCACCTCTTTAAATGGACCAGAGAAGTCTCTTATGCAGACTATTATGAGCGAGCCTTGACCAATGGAGTGCTTAGCATTCAAAGAGGAACAGATCCTGGGGTGATGATTTACATGCTTCCACTAGGTTTTGGGGTTTCCAAGGCTAAAACTGGACATAGTTGGGGAACACCGTTTGACGCTTTCTGGTGCTGCTACGGAACAGGAATTGAATCATTCTCAAAGCTGGGGGATTCTATCTATTTTGAAGAGCAAGGGACAGATCCTTCACTTTACATCATTCAGTACATATCAAGCTCATTTAATTGGAAATCTGGCAAAATTTTGCTCAATCAGACAGTTGTTCCAGCTTCTTCATGGGATCCTTACCTACGAGTGACATTTATGTTATCTCCTGTTGAGAGTACTTCGTCTACACTGAACTTTCGACTACCAAGTTGGACTCGTCTAGATGGTGCCAAGGGGATATTAAATGGTGAATCTTTATCGCTGCCAACTCCAGGGTCTTTTTTGTCAATCACAAGAAAATGGAGTGCTAGTGACAAGCTCACCCTTCAGCTGCCACTTACCGTAAGAACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTGTTAAAGCAATTCTTTATGGTCCTTATCTTCTTGCCGGTCATACGAGTGGCGGTGATTGGGACGTTGAAGCTAAAAATGCAGACTGGATTACTCCTATTCCTGCCAGTTACAATAGCCAACTAGTTTCATTTTTCCAAGACTTTGAAAAATCAACTTTTGTGTTGGCAAATTCAAACCAATCACTTGCAATGCAAAAGTTGCCTGAATCTGGCACTGATTTGGCTCTAAGGGCAACCTTTAGGCTTGTCCTAAAAGAATCTTCGTCAAAGTTTTCAACATTGGCAGATGCTAATGATAGACCAGTGATGTTAGAACCATTTGATCTTCCTGGAATGACTGTGATTCACCAAGGAGAAGATAAACCTCTTCTCATTGTAGATTCTTCAGATGGCAAGCCATCTTCTGTTTTTCTTATGGTACCAGGATTGGATGGAAGAAATGAAACCATATCTTTAGAATCACAGAGTGACAAGGGCTGCTATGTGTATAGTGGTTTGAGCTCTAGTGCAGGAATCAAACTCAGTTGCAAATCTGATTCTGATTCTTCTTTTAAGCAAGCAACAAGCTTTGTTGCTAGGGAAGGATTGAACCAATACAATCCTATTAGTTTCGTGGCTAAAGGAGCAAACAGGTATTTTCTTTTGCAGCCATTACTCTCATTCACAGATGAGCCTTATACAGTATATTTCAATATTCAAGATTGA 2709 0.4134 MSFSVTLLAAPALYSNLLCFLVPICIFLSISLPFHLFFLFNFFNVLLINFRRMKAFLFVFVALTLCGYAVAKECTNIPTQSHTFRYELLTSKNATWRAEVMSHYHLTPTDETAWADLLPRKFLTEQNQHDWGMMYRKIKNTGVSKSPEGFLKEVPLGDVRLHKDSIHGRAQQTNLEYLLMLDVDRLIWSFRKTAGLSTPGTPYGGWEGPEVELRGHFVGHYLSASALMWASTQDDSLKQKMQSLVAGLSACQEKIGTGYLSAFPSEFFDRFESVREVWAPYYTIHKILAGLLDQHTFAGNPQALKMVKWMVDYFYDRVQNVITKYTINRHYQSLNEETGGMNDVLYRLYSITGDSKHLLLAHLFDKPCFLGLLAVQANDIADFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDLVNSSHSYATGGTSVSEFWSNPKRIADNLRTTENEESCTTYNMLKVSRHLFKWTREVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGFGVSKAKTGHSWGTPFDAFWCCYGTGIESFSKLGDSIYFEEQGTDPSLYIIQYISSSFNWKSGKILLNQTVVPASSWDPYLRVTFMLSPVESTSSTLNFRLPSWTRLDGAKGILNGESLSLPTPGSFLSITRKWSASDKLTLQLPLTVRTEAIKDDRPEYASVKAILYGPYLLAGHTSGGDWDVEAKNADWITPIPASYNSQLVSFFQDFEKSTFVLANSNQSLAMQKLPESGTDLALRATFRLVLKESSSKFSTLADANDRPVMLEPFDLPGMTVIHQGEDKPLLIVDSSDGKPSSVFLMVPGLDGRNETISLESQSDKGCYVYSGLSSSAGIKLSCKSDSDSSFKQATSFVAREGLNQYNPISFVAKGANRYFLLQPLLSFTDEPYTVYFNIQD 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00648 902 Pfam Beta-L-arabinofuranosidase, GH127 159 680 IPR012878 -
Phco9g00648 902 Gene3D - 763 886 - -
Phco9g00648 902 SUPERFAMILY AbfB domain 769 883 IPR036195 GO:0046373|GO:0046556
Phco9g00648 902 SUPERFAMILY Six-hairpin glycosidases 197 491 IPR008928 GO:0005975
Phco9g00648 902 PANTHER PROLINE-TRNA LIGASE (DUF1680) 69 900 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00648 Phco-Chr9 4774062 4780731 Tandem