Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00647 ATGAAGGGTTTTGTGTCTGTGTTTGTCGTGCTGGTGTTGTGTGGTTGTGCTGTTGCTAAAGAATGCACAAACATTCCAACGCAATCTCATACCTTAAAGTATGAGCTACTGTCATCCAAGAATGAAACGTGGAAGAAAGAGGTGATGTCTCACTACCATTTGACGCCAACGGATGAATCTGCGTGGGCTGATTTGCTGCCGAGGAAGTTTTTGTCAGAACGACAACAACATGATTGGGCGGTTATGTATAAGAAAATTAAGAACATGGGTGTGTTCAAGTCACCTGAAGGTTTTCTAAAAGACGTGCCTCTTGAGGATGTGAGGTTGCATGAGTATTCCATCCATGGCATAGCACAGCAAACAAACTTGGAGTATCTGTTGATGTTTGATGTGGACAGGTTGATTTGGAGCTTCAGGAAGACAGCTGGTTTACCTACTCCTGCTGCTCCTTATGGAGGGTGGGAAAAACCAGGATGTGAGCTTCGGGGTCATTTTGTTGGGCATTTCTTGAGCGCATCAGCTCTAATGTGGGCCAGTACACAGAACGATAGCCTGAAACAGAAAATGACATCTCTTGTTGCTGGTCTGTCTGCCTGTCAGGAGAAAATTGGAACGGGATATCTATCTGCATTTCCATCTGAGTTTTTTGATAGAGTTGAAGCTATTCAAGAAGTTTGGGCTCCATATTATACCATTCACAAGATTCTGGCTGGTCTCTTGGATCAATATACATTTGCTGGAAACTCTCAAGCTCTAAAAGTGGTAACATGGATGGTTGACTACTTCTACAACAGAGTGCAGAATGTAATAACAAAGTACACTATAAATAGACACTATCAATCACTGAACGAGGAAACTGGAGGAATGAATGATGTCCTTTACAGATTATACAGCATAACAGGAGATTCTAAGCACATATTTTTGGCTCAACTTTTTGACAAGCCGTGCTTTTTAGGGTTGCTTGCAGTGCAGGCTAATGACATAGCTGACATGCATGCTAATACGCATATCCCAATTGTTGTTGGATCTCAAAGGCGATATGAAATCACAGGCGATCCACTTTATAAGGATATTGGGACATTCTTTATGGAAACCATAAATTCTTCTCACAGCTATGCAACTGGAGGGACATCTGTCAGCGAATTCTGGAGAGATCCTAAGAGAATAGCAGATAACTTAAAAACAACAGAGAATGAAGAATCATGCACGACTTATAATATGTTAAAGGTTTCACGCCACCTGTTTAGATGGACCAAAGAAGTCTCTTATGCAGACTATTATGAGCGTGCATTAACCAATGGAGTGCTCAGCATTCAGAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCACTAGGTCTTGGGGTTTCCAAGGCTAAAACATTCCATGGTTGGGGGACACCATTTGACACTTTCTGGTGCTGTTATGGAACGGGAATTGAATCATTCTCAAAGTTGGGGGATTCTATATATTTCGAAGAAGAAGGGAAAAATCCTACACTTTACGTCATTCAGTACATATCAAGCTCATTTAATTGGAAATCTGGAAAACTTTTGCTTAATCAGACAGTTGTTCCAGCTGCTTCATGGGATCCTTACTTACGAGTGACATTTACGTTTTCTCCATTTGAGGTAACTAATACTTGGACTACTTTGAACTTTCGACTGCCTACTTGGACTAGTCTAGATGGTGCCAAGGGGATATTAAATGGTGAAACTTTATCTCTTCCAGCTCCAGGAAATTATTTGTCAATCACAAGACAGTGGAATGCCAGTGACAACCTGACCCTTCAGCTGCCCCTTACCACAAGAACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTATTCACGCAATTCTTTATGGTCCTTATCTTCTTGCCGGTCATACCCTCGGTGGTGATTGGGACCTTAAATCTGGGGCTAATAGTTCCGAATGGATTACTCCTATTCCAGCCAGTTACAATAGTCAACTAGTTTCTTTTTCCCAATTCTTTGAAAATTCTACTTTTGTTTTGGTAACTTCAAACCAAACACTTGGAATGCAAAATTTTCCTGAATCTGGAACTGACTTGGCTCTTCAGGCAACTTTTAGGCTTGTCCCAAAAGAATCTTCCTCAAAGTTTTCAACATTGGCAGATACTAATGATAAATCAGTGATGTTAGAACCATTTGATCTTCCTGGAATGAATGTGATTCACCAAGGAGCAGATAAACCTCTTCTCATTGTAGATTCTTCAGATGGCAAGCCATCTTCTGTTTTTCTTGTGGTACCAGGATTGGATGGAAGAAATGAAACCATATCTTTAGAATCACAGAGTGACAAGGGCTGCTATGTGTATAGTGGTTTGAGCTCTAGCGCAGGAGTCAAACTCAGTTGCAAATCTGATTCTGATGCTACGTTTAACCAAGCAACAAGCTTTATTTCTCAAAAAGGATTGAGCCAATACAATCCTTTGAGTTTTGTGGCTAAAGGCGCAAACAGGAACTTTCTTTTGGAGCCCTTATTCTCATTCAGAGATGAGCATTACACAGTTTACTTCAACATTAAAGGTTGA 2565 0.4086 MKGFVSVFVVLVLCGCAVAKECTNIPTQSHTLKYELLSSKNETWKKEVMSHYHLTPTDESAWADLLPRKFLSERQQHDWAVMYKKIKNMGVFKSPEGFLKDVPLEDVRLHEYSIHGIAQQTNLEYLLMFDVDRLIWSFRKTAGLPTPAAPYGGWEKPGCELRGHFVGHFLSASALMWASTQNDSLKQKMTSLVAGLSACQEKIGTGYLSAFPSEFFDRVEAIQEVWAPYYTIHKILAGLLDQYTFAGNSQALKVVTWMVDYFYNRVQNVITKYTINRHYQSLNEETGGMNDVLYRLYSITGDSKHIFLAQLFDKPCFLGLLAVQANDIADMHANTHIPIVVGSQRRYEITGDPLYKDIGTFFMETINSSHSYATGGTSVSEFWRDPKRIADNLKTTENEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGLGVSKAKTFHGWGTPFDTFWCCYGTGIESFSKLGDSIYFEEEGKNPTLYVIQYISSSFNWKSGKLLLNQTVVPAASWDPYLRVTFTFSPFEVTNTWTTLNFRLPTWTSLDGAKGILNGETLSLPAPGNYLSITRQWNASDNLTLQLPLTTRTEAIKDDRPEYASIHAILYGPYLLAGHTLGGDWDLKSGANSSEWITPIPASYNSQLVSFSQFFENSTFVLVTSNQTLGMQNFPESGTDLALQATFRLVPKESSSKFSTLADTNDKSVMLEPFDLPGMNVIHQGADKPLLIVDSSDGKPSSVFLVVPGLDGRNETISLESQSDKGCYVYSGLSSSAGVKLSCKSDSDATFNQATSFISQKGLSQYNPLSFVAKGANRNFLLEPLFSFRDEHYTVYFNIKG 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00647 854 SUPERFAMILY AbfB domain 728 835 IPR036195 GO:0046373|GO:0046556
Phco9g00647 854 Pfam Beta-L-arabinofuranosidase, GH127 106 630 IPR012878 -
Phco9g00647 854 SUPERFAMILY Six-hairpin glycosidases 164 438 IPR008928 GO:0005975
Phco9g00647 854 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Phco9g00647 854 Gene3D - 713 842 - -
Phco9g00647 854 PANTHER PROLINE-TRNA LIGASE (DUF1680) 17 852 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00647 Phco-Chr9 4764103 4770330 Dispersed/Tandem