Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00609 ATGTTTTGGTTTCTTTGTATTATGGGGATCTCACTAAAATATCAATTATTGAATGTGAATCCATGTTCAGTTAGGCTTATATTTGAGCTGGTGGTTTTATCGTACCTGTGGTTACAAGTTACAAGCCTTGGTTCCATGTCATCCATTGCCATCTCATACGGCGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGATCCAACTCAGCCATAATCTATGGAACACCAGCTCGTTTCTCATTTCTTGGTCTAACAGCTGGAGATGGCTTTGTCTGTGGGCTTCTAATGGGTTCCAATCAACCGTACTGCTGGGGTAGCAGTGCCTATATTGAAATGGGAGTGCCTCAACCTATCACCAATGGAGCACAGTACCTAGAAATCAGTGCTGGTGATTACCATGTTTGTGGCTTGAGGAAACCTTTGATTGGAAGACACAGGTACATTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAAAACTATTTGTTTGGGGGACAGATTGAATCAATCACTGCTGGTTCTGAATTCAATTGTGGTCTTTTTTCTCAGAACAGATCTGTGTTCTGCTGGGGTGATGAGACTAATAGCCTAGTGATTAGTTTGATTCCACAAGACACGAGATTCCAGAAAATTTCAGCTGGTGGGTATCATGTGTGTGGAATCTCAGAGGGAGTGAATTCCAGGACTGTTTGCTGGGGGAGAAGTTTGAACCTTGGGGAAGAAATTTCAGTGGCACATGCAGGCCAAGGAAACGTTGATCTGGCTCCAAATGATCCCATGCTTTCTGTAGTAGGAGGGAAGTTCCATGCATGTGGCATTAAGAGCTATGATCGTGGAGTGATTTGTTGGGGCTTTATCATCAAACGAAGCACTCCATCTCCTAGAGGGATTAAGGTTTTTGAAGTTGCAGCCGGTGATTATTTTACTTGTGCAGTTCTTGCTGAGAAATCTCTTATGCCTTCATGTTGGGGAGTTGATTTTCCCACCTCACTTCCTTTAGCTGTTTCACCAGGAATATGTCAACCTGCTCCATGCCCTCCTGGTTCCTATGCCATTGATCAGCATAAAGGTCTCTGCAAATCACCAGATTCTCGTGTTTGCATGCGATGCAGTGGTGGTTGTCCTCCTGAAATGTATCAGAAGAGTGCATGCAATTTGGCTTCTGATAGACTATGTGAATATAACTGTGCCTCTTGTTCTTTATCCGAATGCTTCTTGAACTGCTCGTCTTCATATTCCTATGCTTCCTCTCACAAGAAAACTGAAAATTTTTGGGCTTTACAGTTGCCAGTTGTCATTGCTGAGATTGCTTTTGCAGTTTTCATAGTTAGTGTCGTGTCAATAACTGCAATTTTATACGTCCGCTACAGGCTAAGAGATTGTGAGTGTTCAAAAGGATCAAAGGGAAAGAAACTCAACGGGAGTTCTTCCCTGCAAAACGAGAATAAGGTGAGGCCAGACATTGAAGAGTTCAAGATCAGAAGGGCTCAAATGTTCACCTATAAGGAACTAGAAAGTGCAACTTGTGGATTCAAGGAAGAGTCCATAGTGGGGAAGGGGAGTTTCTCGTGTGTGTTCAAGGGAGTGTTGAAAGATGGGACAGTTGTTGCTGTCAAAAGGGCAATAGTGTCTCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACTGAACTTGACTTGCTCTCAAGGTTGAACCACGCTCATTTACTCAACCTTCTAGGCTATTGTGAAGAAGGTGGTGAGAGACTTCTTGTGTATGAGTTCATGGCTCATGGCTCTTTGCACCAACACTTGCATGGAACAAACCAAGTGTCGAGAGAACAGTTAAATTGGATAAGAAGGGTGACTATTGCAGTGCAAGCAGCACGTGGAATTGAATATTTGCATGGCTACGCTTGCCCTCCTGTGATTCACAGAGACATCAAGTCCTCAAACATTCTCATCGATGAAGAACACAATGCAAGAGTGGCTGATTTTGGTTTATCATTGTTAGGCCCTGCAGATAGTGGTTCACCACTGGCTGAACTCCCAGCTGGGACTCTTGGCTATCTTGATCCTGAATACTATAGGCTTCACTACCTCACAACCAAATCAGATGTCTACAGTTTTGGTGTTCTTCTTTTGGAGATTCTAAGTGGTAGAAAAGCCATTGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATAAAGTCAGGAGATATAACTGCAATTTTGGACCCGGTTTTGAAACCCGCTCCTGATCTGGAAGCCTTGAAGAGAATAGCCAATGTGGCTTGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGACCCTCAATGGATAAAGTAACAACAGCTTTGGAGAGAGGTCTTGCACAGTTAATGGGAAGTCCATGCATTGAGCAGCCTATTTTGCCCACTGAGGTTGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAAAGATCCTCAAACAGGTCAATTTCTGAGACTGATGTGGTAGAAGCTGAGGACCAAAGGTTTGAGTTCAGGGCACCCTCATGGATTACTTTCCCCAGTGTGACATCTTCTCAAAGGAGAAAGTCATCAGTGTCTGAGGTAGATGTTGATGGGAAGAATAATCCAGAAGGTAAGAACATGGGCAATGTTGGAGGTGATGTTTTGAGAAGCCTTGAAGAAGAGATTGGTCCTGCTTCTCCAGGAGAGAGGCTGTTCTTGCAGCACAACTTCTAA 2757 0.4367 MFWFLCIMGISLKYQLLNVNPCSVRLIFELVVLSYLWLQVTSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYGTPARFSFLGLTAGDGFVCGLLMGSNQPYCWGSSAYIEMGVPQPITNGAQYLEISAGDYHVCGLRKPLIGRHRYISLVDCWGYNMTKNYLFGGQIESITAGSEFNCGLFSQNRSVFCWGDETNSLVISLIPQDTRFQKISAGGYHVCGISEGVNSRTVCWGRSLNLGEEISVAHAGQGNVDLAPNDPMLSVVGGKFHACGIKSYDRGVICWGFIIKRSTPSPRGIKVFEVAAGDYFTCAVLAEKSLMPSCWGVDFPTSLPLAVSPGICQPAPCPPGSYAIDQHKGLCKSPDSRVCMRCSGGCPPEMYQKSACNLASDRLCEYNCASCSLSECFLNCSSSYSYASSHKKTENFWALQLPVVIAEIAFAVFIVSVVSITAILYVRYRLRDCECSKGSKGKKLNGSSSLQNENKVRPDIEEFKIRRAQMFTYKELESATCGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGTNQVSREQLNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDITAILDPVLKPAPDLEALKRIANVACKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSISETDVVEAEDQRFEFRAPSWITFPSVTSSQRRKSSVSEVDVDGKNNPEGKNMGNVGGDVLRSLEEEIGPASPGERLFLQHNF 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00609 918 MobiDBLite consensus disorder prediction 822 843 - -
Phco9g00609 918 MobiDBLite consensus disorder prediction 822 838 - -
Phco9g00609 918 FunFam Serine/threonine-protein kinase-like protein CR4 42 209 - -
Phco9g00609 918 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 354 402 IPR001368 GO:0005515
Phco9g00609 918 SUPERFAMILY RCC1/BLIP-II 39 295 IPR009091 -
Phco9g00609 918 SUPERFAMILY Protein kinase-like (PK-like) 501 794 IPR011009 -
Phco9g00609 918 Gene3D - 89 347 IPR009091 -
Phco9g00609 918 FunFam Receptor protein kinase CRINKLY4 599 801 - -
Phco9g00609 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Phco9g00609 918 MobiDBLite consensus disorder prediction 867 892 - -
Phco9g00609 918 Gene3D Phosphorylase Kinase; domain 1 491 598 - -
Phco9g00609 918 FunFam serine/threonine-protein kinase-like protein CCR1 491 598 - -
Phco9g00609 918 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Phco9g00609 918 ProSiteProfiles Protein kinase domain profile. 521 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00609 918 SMART serkin_6 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g00609 918 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Phco9g00609 918 Gene3D Transferase(Phosphotransferase) domain 1 599 802 - -
Phco9g00609 918 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 29 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00609 Phco-Chr9 4414868 4417624 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Phco9g00609 PK_Tyr_Ser-Thr 4.1e-43 CL0016